Pseudochaenichthys georgianus (South Georgia icefish): 117453349
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Entry
117453349 CDS
T09629
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117453349 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117453349 (lrit3a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_1
Ig_2
LRR_14
ig
LRR_5
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
117453349
NCBI-ProteinID:
XP_033948055
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All DBs
Position
10:9823997..9835201
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AA seq
634 aa
AA seq
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MRQLLLVYVILCCLSLAHPFCPSQCTCVLHGLTDGARTRSVVCNDPDMADVPVNVPVDTV
KLRIEKTMVRRIPTEAFYYLVELRYLWITYNSITSVDSAGFYNLKVLHELRLDGNMISVF
PWESLKEMPMLRTLDLHNNRITNVPNEAIPYLFNITYLDLSSNKLSTLPSDLMDIWPPFN
GAPIFANASQKVVLGLQDNPWFCDCKISKLIELSKMSGTPVVLMDLFMACSGPENLAGFP
FQRAELDNCVKPSVMSSATKITSDLGSNVILRCDATGFPTPSLSWANSDGSPVDNTVQES
PGDGIRWSIMSLHGISFEDAGNYNCKAKNYAGNAEATISVSVAGDISTTTVPLRLSNKTE
PTKQVTTVIPPTDTPISTTMMTTAIPTTSTTSTTRPKTTTNKKLQKGPLKQAKPQPGGDG
RKLAADEKSKIIDKSKSVKDIKIVEETSDTAVLLWRVDGLPNDAPLTVVYSPYDEDDMKR
TVETKAGSGKVLLEGLSSGIRYSVCLIVKGSAAGKDPCTEFYTLDDVEDGDKLFIFISGI
ACILVMSLIALLLYNIIDLYYKGQNTEYNEEELEKDSYVKFETISMKQRTLNGQPTQLWT
RRAHESERMLLCSRSSNDSQMTSKSDSSRCEYLC
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaacttctattagtgtatgtaatcctatgctgcctcagtttggctcatcccttc
tgcccatcccagtgtacctgtgtcttacatggacttaccgacggagcaagaacaagatct
gtggtttgcaatgatccagacatggctgacgtcccagtcaatgtccctgtggacacggtc
aaacttcgaattgagaaaaccatggtacggcgaatcccaacagaagctttttactacctg
gtggagctacggtacctgtggattacatacaattccataacctcagtggactctgcaggt
ttctacaacctcaaagtgctccacgagctgaggctggatggaaatatgatctccgtattc
ccttgggagtctctgaaagagatgccaatgctgaggacactggatctacacaacaacagg
atcactaatgttcccaatgaagcaataccctatctcttcaacattacatacttggatcta
tccagcaacaaattatccaccctgccctctgatctaatggatatctggccgcccttcaac
ggagcacccatctttgctaacgcctcccagaaagttgtattagggctccaagataacccc
tggttctgtgactgtaaaatttcaaagctgattgaactttcaaaaatgtctgggacgcca
gttgttttgatggacctgttcatggcctgcagtggaccagagaatctggctggtttccct
tttcagcgtgctgaacttgacaattgtgtaaaaccgtccgtcatgtcttcagcaaccaag
atcacatctgatttgggaagcaatgttatcctgcgatgtgatgccacagggtttccaaca
ccaagtctttcctgggctaattctgatggctcacccgtcgacaacacagtccaggagtca
cctggagacggtatcagatggtccatcatgagtttgcacggaatttcgttcgaagacgcg
gggaactacaattgcaaagctaagaattatgccggcaatgcagaagccaccatatcggtc
tcagttgcaggtgacatcagtaccaccaccgttccactaaggcttagcaacaaaactgaa
ccaactaaacaagtcacaacagttattcccccaacggacactcccatctcaaccactatg
atgacaacagctatcccaacaacgtccacaacgtccacaacgaggccaaaaacgaccaca
aacaagaaactacaaaaaggcccattgaaacaagcaaaaccccagccaggaggcgatggg
agaaagcttgcagcagatgaaaagagcaagataatcgacaaatcaaagtctgtcaaagac
attaagattgtagaggaaacatctgacactgcagtgttgctctggagagtagatgggtta
ccaaatgatgccccacttacagtggtatactcaccctatgatgaggatgacatgaaaagg
acggtggagacgaaagctggcagtggaaaagtgctcctggagggattatcatctgggatt
aggtactcagtttgcctcatagtaaaaggtagtgcggctggaaaagatccttgcactgaa
ttctacacattggacgatgtagaggatggtgacaagcttttcatttttataagcggcatt
gcctgtattttggttatgtctctcattgcccttttattgtacaacattattgatttgtac
tacaagggacaaaacacagaatataatgaagaggagcttgaaaaagacagctatgtcaaa
tttgagacaatttcaatgaagcaaaggactttaaatggtcaaccaacgcaactttggaca
agaagagctcacgaatcagagcgaatgctcctgtgctccaggtcgagcaatgactcccaa
atgacctccaagagtgacagttcccggtgtgagtatctttgctga
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