Pseudochaenichthys georgianus (South Georgia icefish): 117453372
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Entry
117453372 CDS
T09629
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04020
Calcium signaling pathway
pgeo04510
Focal adhesion
pgeo04518
Integrin signaling
pgeo04540
Gap junction
pgeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117453372 (pdgfc)
04020 Calcium signaling pathway
117453372 (pdgfc)
09133 Signaling molecules and interaction
04518 Integrin signaling
117453372 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117453372 (pdgfc)
04540 Gap junction
117453372 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117453372 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117453372 (pdgfc)
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Growth factors (RTK binding)
117453372 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
117453372
NCBI-ProteinID:
XP_033948084
LinkDB
All DBs
Position
10:9402359..9449787
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AA seq
364 aa
AA seq
DB search
MCVVIQTITSTELCDRQPPLIQMILPLLFLLASLLQQYGSEAESSHVSKFHTPSVKEQNG
VQDSNQEKIITVSGEGMVHSPAFPHRYPRNTELVWRLVAPNNMRIQLTFDQRFGLEDPED
GICKYDFVELEDLTEKSILGRWCGSQSAPASLTSKGSQIRIRFMSDEYFPSEPGFSIRYS
PLPVSVSEPEVPAVIPPSQQGVEELSEAVAGLDSVEEVMKFLEPERWQLDMEELYKPTWH
VLGKSFLHNKKARGGADLNLLREEVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRC
GGNCACCSHRCFDCQCVPARVTKKYHEVLLLKHRSGVKGLQKSMTDVLLEHHEECACECK
DDWD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggtgatacaaaccatcacttcaacagagctctgtgatcgccaaccaccactc
atccaaatgatccttccattattattccttcttgcatcgcttctccaacaatatggctcg
gaagctgaatcaagtcatgtcagcaaatttcacactccaagtgtaaaggagcaaaacgga
gtgcaagattccaatcaggagaagatcatcacagtgtctggagaggggatggtccacagc
ccagccttccctcaccgttaccccaggaacacggaactggtctggagactagtggcgccc
aataacatgaggatccagctcaccttcgatcagaggttcggtctggaggaccccgaagat
ggcatatgcaagtacgactttgtggagttagaggacctgaccgagaagagcatcctgggt
cgctggtgtgggtcacagtcggctccagctagtctcacttccaaaggcagtcagatcagg
atccgcttcatgtctgatgagtacttcccctctgagccgggattctccatccgctactcc
cctctgcctgtgagtgtatcggagcccgaagtccccgcagtcatccccccgtcccagcag
ggggttgaggagctgtcagaggctgtggcagggctggacagcgtggaggaggtcatgaag
ttcctggagccggagcgatggcagctggatatggaggagctgtacaaaccaacgtggcat
gtgctggggaaatccttcctccacaataagaaggccagaggaggagctgatctaaatctg
ttgagggaggaagtgcgactgtacagctgcaccccacgaaacttctctgtttccttgcgt
gaggagttgaagaggacagatgccattttctggccgagctgcctcctggtgaagcgctgt
ggtggaaactgtgcctgctgctctcaccgctgcttcgactgtcagtgtgttcctgccagg
gtcacaaagaaataccatgaggttctcctgttgaaacatcgaagcggagtcaaaggcctg
cagaagtccatgactgatgtcctcctggagcaccatgaggagtgtgcctgtgagtgtaaa
gatgactgggactga
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