Pseudochaenichthys georgianus (South Georgia icefish): 117453465
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Entry
117453465 CDS
T09629
Symbol
poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03410
Base excision repair
pgeo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117453465 (poll)
03450 Non-homologous end-joining
117453465 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117453465 (poll)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117453465 (poll)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117453465 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
117453465 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
PTCB-BRCT
Cdd1
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
117453465
NCBI-ProteinID:
XP_033948174
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All DBs
Position
1:complement(16581751..16594943)
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AA seq
580 aa
AA seq
DB search
MVPSEGLWHPPSRDTMEPRHGIMKAFPKVKRARVLQGKDAPPVKKKPEEHDVKGNCFKGV
TVYILPAGIGNARCQIFERQIEQNGGQTERALSPGVTHVVVDDSMDSERAMRLLKVDCMP
SGVQLVKCIWLSSCITQKQLLDVDSYSLLLPKRQSETKNENIEEELPDVQPTATAIVEPT
SDHSKQEETLDMAVLDTQEDVRGEEDGVSQSDLEALITGQTPQEETPGPSLEPATDSAAQ
SVVPGKWVCAQSSQSKSNNFNKDITDKLEVLAKAYTHQGDKWRALSYSKAVNALKSYHKP
ITSYQEACQIQGIGKRMADKIDEIMESGHLRKLDHLGDAVPVLELFTNIWGAGTKTAQLW
YQLGFRTLEDIRTKAHLSTTQKIGLKHYDDFLDRMPREEAAAIEKVVKDAVHAVDPGLLS
MACGSYRRGKATCGDVDVLITQPDGKSHKGVFSKLLQSLRDSGFLTDDLVSHEDNGEQKK
YMGVCRLPDHRHRRLDIIVVPYNEFACAIMYFTGSAHFNRSMRAMAKTKRMSLSEHSLNK
DVVRQGSLKVFGGTPFTTKTEKDVFSILGIPYREPHERDW
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggttccatctgagggcctctggcaccctccttcaagagacacaatggagcctcgtcac
ggtattatgaaagcctttcccaaagttaaaagagccagagtgttacagggaaaggatgct
cccccagtgaagaagaaacctgaagaacatgatgtcaaaggaaactgttttaaaggcgtc
acagtgtacattctgcctgctggaataggaaatgccagatgccagatctttgaaaggcaa
attgagcagaatggaggacagacagagagagcgctgtctcccggtgtcacccatgttgtt
gtggatgacagcatggacagtgaaagggcgatgcgattacttaaagtggattgtatgccc
tctggagtccaactggtgaaatgcatttggttgagctcgtgcatcactcagaaacaactg
ctggatgttgacagctacagccttcttttacccaagaggcaatctgaaacaaagaatgaa
aacattgaagaagagctgccagatgtccagccgactgcaaccgctattgttgagccaacg
tctgatcacagcaagcaagaggagactttagacatggcagtcctagacactcaagaggat
gtgcgcggagaagaagacggggtctctcagagtgacctggaagctcttatcactggtcag
accccccaagaggagactcctggccccagcctggagcccgctacagactctgctgctcag
agcgtcgtcccagggaagtgggtctgtgcccagtcttctcagtccaaaagtaataacttc
aacaaggacatcacggacaaactggaagtgctggccaaggcctacactcaccagggggac
aagtggagggcgctgagctactccaaggctgtcaacgctctgaagagttaccacaagccc
ataacatcctaccaggaggcttgccagatccaaggaattggaaaacgcatggccgacaaa
atcgatgagatcatggagagcggtcacctgcggaagctagaccacctcggggatgctgtg
ccagtgttggagctttttactaacatctggggtgcagggactaaaactgcacagctgtgg
taccaactgggatttcgcacactggaggacatccgcacaaaagcccacctgagcaccact
cagaaaataggactcaagcactacgatgattttctggaccggatgcccagagaagaagca
gctgccatagagaaagtggtgaaggatgctgtccatgcagtagacccaggcctgttatcg
atggcgtgtggctcctaccgtcggggaaaagccacgtgtggagatgttgacgtacttata
actcaacctgatggcaaatctcacaaaggggttttcagcaaattgttgcagagcctccgt
gacagtgggtttttgacggatgacctggtgagccacgaggacaacggagagcagaagaag
tacatgggcgtgtgccgtttgccagaccaccgccatcgcaggctggacatcatcgtcgtg
ccctacaacgagtttgcgtgtgctatcatgtatttcactgggtcggcacacttcaaccgc
tcaatgagagccatggcaaagacaaaaagaatgagcttatcggaacactcgctgaacaaa
gatgtggtgcgtcagggtagcttaaaggtgtttggcggcactccattcactacaaagaca
gagaaggatgtttttagtattttaggcataccatacagagagccccatgaaagggactgg
tga
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