Pseudochaenichthys georgianus (South Georgia icefish): 117453494
Help
Entry
117453494 CDS
T09629
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04136
Autophagy - other
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117453494 (atg2a)
04136 Autophagy - other
117453494 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117453494 (atg2a)
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117453494 (atg2a)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117453494 (atg2a)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117453494 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
BUD22
CDC45
CPSF100_C
DUF789
RNA_pol_Rpc4
RNA_pol_3_Rpc31
Mpp10
Motif
Other DBs
NCBI-GeneID:
117453494
NCBI-ProteinID:
XP_033948202
LinkDB
All DBs
Position
10:complement(17105063..17139292)
Genome browser
AA seq
2033 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLDQLGLDLYNGSGVIKEINLDVWAVN
ELLESLGAPLEIVDGFVNTITVTIPWQALLTDHCTLEVSGLQITCRPKYRTSGGWDSQGW
SSSMTSSMQLAQECLKDPPEASEEPPPQLEGLEMFAQTIETVLRRIKVTFIDTIVRIEHQ
PLDLETGVALEMHIKRLEYFDEAVRDPASQTAVPVDIHQPPAFLHKILQLSAVQLFYDST
GKVQGPLKRQHPESATASEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKDEEGDDNEEE
DEEKAKPLKSTPCPPSQPLLIGSCSGFIETTVKIKQNDMLPGPKFELDGKVGCVHMLLSP
DQITHLTDLLAALCIDTETESKCDGALSRPLDSDDLRLIEEDLSKQLGSSPRDREWETEP
DLDPYVTCQENGEMFFSMCPAGMSSSVTSVRSGSEFSDSDMESSTHSLSSFTQPASLSSQ
GMGNGPRRHPLAGCLSSLPQASGRTRGRSHSGAEQLKPDALLRLTLGGLTLTLLQEDPPS
NPDEATSLAQVSQVFFRELAFFKDSMFSERDFHHLRGGFAKACPQSHLRVTGAAVQVACE
MRSGSRHNRAVTSDLSFSRLELLECLWEDGKPQYSELLQFQKAGLFTVGAAARPCAQLHY
GLTEKHMRKGKQRVVRRDSVVRVELAELSAELDLDILTRLGNLSKAFAHCPTDTAAPGLM
QTQSSELYSSFSLLSPHAILRLRFPIPDLRPLPKRRPPTQRAVRQETLVLELTELELKHQ
EAPDLQSEQPAVGEPWAPCLTQLLEASFTDLHGSYEGWEGGSFPFIRVKKNRDSSPRISV
HVRGGDPQGPAAGLGGMNLISDLGAAFFESHCEINDKTSSPFSSNRTMFETEEMVIPADP
EEMRQFQAQCVAQCQCAVDIHLPLAYILLPSKQAFQSFYNRINNDLLMWEPPPPSASSPE
HSRQHHEEFQLCKSAFRLDSDSDEDDPQFFLASDSSGKTKAPRPNHNLSLLSLTVIISKG
RLQTRTDKKEDQSHGEIVLDLEGGKIFSVAQHQNDPNLNFLCIESRRVELYHKAVVKDTP
IPQRLEIPKFNPPKHLDPTIYPTEVGVSSVSGKEGELQMLSTAIKVTLDPQRGVKEFLVA
LRLQGATMRHFMAPTNHSWHEQLVDFVDVIDDPILGYTAPAVITVLHTHLATCAVDYRPM
YLPLRVLFTAESFSLSSNIIVDTATFHLRFILDDSALYLSDKCETDVVDLRRDYVCVLDI
DLLELAITTWKGSDKGKLSQPLFELRCSNNVVHVHTCADSCAALVNLLQYLVSQGDLHPP
PRHTSPTEIAGQKLPLSESPAAMLPCPPAETAEINQYDLADALIDTEKSHREESSDPGSP
SMPRGSPVSVYLFPGEAPKRSPSVLLVEDAELDGLVATATEAQADMMSEEGSDGSTDNDD
FCILEAPGMGIPPRDGEPVVTVLSEGPIKLKESHFSRPRGSSDLLRAPSRFPVPQSRVVL
REISVVWHLYGGKDFGGKPMSIHAQNTNRGRSAPAGVRGSPSRSATTSRPQNSWRWAGGS
GRQHQLLMEIQLTKVSFQHESYPGAVAGQEGFLMAGVGPGGEQPLSRQVFIVQELEVRDR
LASSQLNKFLYLYTSESMPRRAHSNMLTVKALQVCPESGLGGPECCLRISLLPLRLNIDQ
DALFFLKDFFSSLASYVNPYLPVDPASEVKADPSQKAPEEAEAGLGPDLSASVETTFSEQ
SSSSAGSTSSSSSDQPIYFREFRFTSEVPIWLDYQGKHVVIEQGTFAGILIGLAQLNCSE
LKLKRLCCRHGLLGVDKVIQYAVTEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFW
LPIEQYRKDGRIIRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPLN
RFAITEGRAPSSRPRRAAQPADLREGVAKAYDTVREGVIDTAQTLCDVASRGHEQKGLPG
AVGGVLRQIPPTVVRPLIVASEATSNLLGGMRNQIKPDARKEDFLKWRTDGQE
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctggcttttcccctggtcaggctcaatcaagaagcgggcctgtcggtacctc
ttacagcactacctcggccactttctgcaggaaagactgagcttggaccagctgggtttg
gacctgtacaacggtagcggtgtcatcaaggaaatcaacctcgatgtctgggcggtcaat
gagcttttggagtctcttggggctcctctggagatagtggatggctttgtgaacaccata
acagtgaccataccctggcaagctctcctgactgatcactgcactttagaagtttctggt
ctccagataacatgtcgacccaagtacaggaccagtgggggatgggactctcaaggctgg
tcatcaagcatgacctccagcatgcagctggctcaggagtgcctgaaggaccccccggag
gcttcagaggagcccccgccccagctggaggggctggagatgtttgcacaaaccattgag
acagtccttcgtcgtattaaagtcaccttcatagacactatcgttcgcatcgagcaccag
cccctggacctggaaacaggcgtggccttagagatgcacatcaaacggctggagtacttt
gatgaggccgtgcgagatccagccagtcagacggccgtgcctgtggacatccaccagccg
cccgccttcctgcacaagatcctccagctgagcgctgtgcagctgttctacgacagcacc
ggcaaagtacagggtcctcttaagcggcaacaccctgaatcagcaacggcaagtgaagga
gaggaggaggaggaggaggaagaggaggaagaagaagaagaagaagaagaagaagaagag
gaggaggaggaagaggaagaagaggaaaaagatgaagaaggagatgataatgaggaggaa
gatgaagagaaggcgaagcccctgaaatccactccctgccctccgtctcagccgctgctc
ataggaagctgttccggtttcatcgagaccaccgtcaagatcaaacagaacgacatgctg
cctggaccaaagtttgagttggacggcaaggtgggctgtgtccacatgctgctgtctcca
gatcaaataacccacctgacagacctgctggcagctctctgcatagacaccgagacagaa
tctaagtgtgatggagccctcagtcggcccttggactcagatgacctgcgtctgattgag
gaggacctcagtaagcagctgggctccagtcccagagacagagagtgggaaactgagccc
gacctggacccctacgtcacctgccaggagaatggagagatgtttttctccatgtgtcct
gctggaatgagcagtagcgtgacgtctgtgcgctctggcagcgagttctcagacagcgat
atggagtcctcgacacacagtctgtccagcttcacacagccggcatcactgtcttcacag
ggcatggggaacggtcccaggaggcatcctttagcgggctgtctgtcgagtctaccccag
gcaagcggccggaccagaggacgctcccacagcggagcggagcagctgaagccggatgct
ctgctgcgtctgacactcggtgggctcaccctcaccctgctgcaggaggacccgccctct
aatcctgacgaagccacgtcgttggctcaggtgtctcaggtgttcttccgagagctggcc
ttctttaaggacagcatgttcagcgagagggacttccaccatctgagaggcggcttcgcc
aaggcctgccctcaatcccatctcagagtgacaggcgcagcagtgcaggttgcttgtgag
atgcggagtgggtcacgccacaaccgggccgtgacctctgacctttccttcagcagactg
gaactgttagagtgcctctgggaggacgggaagccccaatacagcgagctgcttcagttc
cagaaagccggtctgttcacagttggagctgcagccagaccatgtgcacaactacactat
ggcctcactgagaaacacatgcgtaaaggtaaacagcgagtggtgcggagggacagtgta
gtgcgggtggagctggcagagctgagcgctgagctcgacctggacatcctcactcgcctg
gggaacctgagcaaggccttcgcccactgtcccacagacactgctgcaccgggactcatg
cagacccagagcagcgagctgtactcctccttctccctcctctccccacacgccatcctc
aggcttcgtttccccatacccgacctgcggcccctccctaagcgtcgccctcctacccag
agggcagtgcggcaggagactctcgtgctggagctgacggagctggagctgaagcaccag
gaggccccggacctccagagtgagcagcctgcggtgggggagccgtgggccccctgcctc
acacagctgctggaggcctccttcactgacctgcatgggtcatacgagggctgggagggc
ggctctttcccctttatcagagtgaagaagaaccgcgactcttcaccgaggatatcggtg
catgtgcgtggaggggaccctcagggcccggcagcaggtctgggggggatgaacctcatc
agtgacctgggggccgccttctttgaaagtcactgtgaaattaacgacaaaaccagctcc
ccgttctcctccaaccgcaccatgtttgagactgaggagatggtgattccagccgacccc
gaggagatgcgtcagtttcaggcgcagtgtgtcgctcagtgtcagtgtgcggtggacatc
cacctgccgctggcctacatcctcctgcccagcaaacaggccttccagagcttctacaac
aggatcaataatgatctgttgatgtgggagccgccccccccctccgccagcagccccgag
cacagccgccagcaccacgaagagttccagctctgcaagtcggcctttagactggactct
gattcagacgaggacgaccctcagttcttcttggccagtgattcatctggaaagacaaaa
gctccccgtcccaaccacaacctcagcctcctctccctcactgtgatcatcagcaaaggg
cgcctgcaaaccagaacagacaagaaggaggaccagagtcatggggaaattgtgcttgac
ctggaaggggggaagatattcagcgtggcgcagcaccagaacgaccccaatctcaatttc
ctgtgtatagagagccgacgagtggagctataccataaagcggtggtgaaagacaccccc
atcccacagcggttggaaatacccaaattcaatcccccaaagcacttggaccctaccatc
taccccacagaggtgggggtgagcagtgtgagcggaaaggagggggagttacagatgttg
tccacagccatcaaagtcacactggacccacagaggggtgttaaggagttcctagttgcc
cttcgacttcaaggtgccaccatgaggcacttcatggcaccgaccaatcacagctggcat
gagcagctggtggactttgtggatgtcattgatgatcccattctgggatacacagccccc
gccgtcatcactgtcctccacacacacctcgctacctgtgcggtcgactacagacctatg
tacctgccgctgcgcgtgttgttcacagcggagtccttctctctgtccagtaacatcatc
gtagacacggccacctttcacctcagattcatcttggatgactctgctctctacctctct
gacaaatgtgagactgacgttgtggacttgaggagagactatgtgtgtgttctggacatt
gacctgctggagctcgccatcaccacatggaaaggcagcgataagggcaagctgtctcag
cctctcttcgagcttcgatgctccaacaatgtggttcacgttcacacctgtgcagattcc
tgcgccgccctcgtcaacctgctgcagtacctcgtctcgcagggggacctgcaccccccg
ccgcgacacacctcacccaccgaaatcgctggccagaaattaccactgtcagaaagtcct
gcggcgatgctgccctgccctccagctgaaactgcagagatcaaccagtacgacctcgct
gatgccttaatcgacacggagaagagccaccgagaagagagctcagatcctggttcaccc
tccatgcccagaggctcgcccgtctccgtctacctgttcccaggcgaggccccgaagcga
agcccctccgtcctgctggttgaggacgcagagcttgatggactggttgccacagcaaca
gaggcgcaggcagatatgatgtctgaggaaggatccgacggctcgaccgacaacgatgac
ttctgcatattggaggcccctgggatgggcattcctccgcgggacggggagcccgtggtg
acggtgttgtccgagggccccatcaagctgaaggagagtcacttctccagacccagaggc
agctcagacctgctgcgagcgccgagccgcttccccgtgccgcagagcagagttgtgctg
agggagatctccgtggtctggcatctctacgggggcaaggactttgggggcaagcccatg
tcaatacatgcccaaaacactaacagaggtcgttcagcccccgctggagttcgggggtcc
ccgtctcgctcggccaccacctcccgtccccagaactcgtggcgctgggccggaggcagc
ggccgccagcaccaactattgatggagatccagctcaccaaggtgtccttccagcatgag
tcctacccaggggcagtagcggggcaggaggggttcctgatggctggcgtgggccccggg
ggcgagcagcccctctccagacaggtgttcatcgtccaggagctggaggtccgagaccga
ctggcctcctcacaactcaacaaattcctttacctctacaccagcgagagcatgccgcgc
cgagcccactccaacatgctgacggtgaaggccctgcaggtctgtccagagtctggcctc
ggtggaccggagtgctgtcttcggatcagcctgctgcctctacgtcttaacatcgaccag
gacgcactgtttttcctgaaggactttttcagcagtctagcttcctatgttaacccttac
ctgcctgtggaccctgcatccgaagtgaaagcagacccctcccagaaggcccctgaggag
gcggaggctggtctgggacctgacctctcagcatctgttgaaaccaccttcagcgagcag
agctcctcctctgccggctccacctcctcctcctcctccgaccagcccatctacttccgg
gagtttcgattcacctctgaagtgcctatctggcttgactatcaaggcaaacatgttgtc
attgaacagggaacgtttgcaggtatcctgattggtctggcccagttgaactgctctgag
ctgaagctgaagaggctctgctgcagacacggtctcctcggtgtggataaagtgatccag
tacgccgtcactgagtggctgacggacatcaggaagaatcagctcccgggcattctggga
ggagtgggtcccatgcactcagtggtccagctgttccacggagtgagggatctgttctgg
ttgcccatagagcagtacaggaaggacgggcgtattatccgaggtctccagaggggggca
gcctccttcgggacgtccacagcttcagctgctctggagctcagcaacaggctggtgcag
gccatacaggccacagcagagacggtgtacgacatactgtctcccactccccccctgaac
cgctttgccatcacagagggccgggccccctccagccggccccgcagagccgctcagccc
gcagacctgcgagaaggcgtggccaaggcctacgacaccgtcagagagggagtgattgac
acggctcagaccttgtgcgatgtagcatcccgcggccacgaacagaagggtctgcccggc
gctgtgggcggcgtcctgcggcagatcccgcccaccgtggtccgacctttaatagtggcc
tctgaagcaacctccaatctgctcggtggcatgaggaaccagatcaaaccagacgcccgg
aaggaggacttcctgaagtggcgcaccgacggccaagaatga
DBGET
integrated database retrieval system
