Pseudochaenichthys georgianus (South Georgia icefish): 117453509
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Entry
117453509 CDS
T09629
Symbol
arhgef6
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04518
Integrin signaling
pgeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
117453509 (arhgef6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117453509 (arhgef6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117453509 (arhgef6)
Membrane trafficking [BR:
pgeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117453509 (arhgef6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
RhoGEF67_u1
SH3_1
SH3_9
CH
PH
SOS1_NGEF_PH
HAUS-augmin3
IcsB_M
Mis12
Motif
Other DBs
NCBI-GeneID:
117453509
NCBI-ProteinID:
XP_033948219
LinkDB
All DBs
Position
10:complement(15801805..15825491)
Genome browser
AA seq
776 aa
AA seq
DB search
MNPEEQTVTWLISLGVLSSPKKNIADPEEFLKTSLKDGVVLCKLTERLIPGFTPKYCQDP
RTEADCITNIKEFLRGCSSLKVEGFEPECLYTGENFGKVLTTLMAVNFATQDCAAERCSQ
SGAHSPSQSTSSHTLSSAKTKGSLRRQSKSVEMSENGGGGQLMVKARFNFKQNNEDELSF
NKGDLIHVMRQEEGGWWEGSLNTKTGWFPSNYVREIKPCEKPVSPKGTQLTKNYYSVVVQ
DILEHEREFVKELQTVLSCYLRPLQASDKLSSADSATLCGNLEEILTFQQGLCAALEDCT
KVSEGQQRVAGCYLNLMSQIKTLYLAYCSSHPSAVCILTDHSEELDKFMESQGASAPGIL
ALTTSLSKPFMRLDKYPTLLQELERHVEEAHPDYADIVKATATCRSLVTQCQELRKRRNL
ELQILSEPVRGWEGDSMKSLGHVAYMSQVHVKNGSSEEKEERYLMLFPNMLVMLSASPRM
SGFIYQGRLPLTGTTVTRQAEDADNAHYALDITGSVIDRVTVFCSSSQELQEWLDQLQPF
TKGSSPAGTILKTVEGKPLSMVGPPTHLSHLGSLSAVSRGPLEPPKISKPWSLSCLRPAP
PLKPSAALGYKERMSYIMKDSSKSPRPMKKFLPGNRKKERKPSDDEFHTRKSTVALEEDA
QILRVIEAYCTGASLLQTTTGARLSVRKECVPQVLLPEEEKIIVEEMKSNGQTVIEEKSL
VDAVYALKDEVHELKKENKWMKQFLEEEQKSRKELERVVRKLAKQKNDCAWDDGAH
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaggagcagaccgtaacgtggttgatatctctcggagtgctcagctcgcct
aaaaagaacatagcggacccggaggagtttttgaaaacctcgctgaaggatggggtcgtc
ctgtgcaagctcacggagagacttatacctggctttactcccaagtattgccaggatccg
agaactgaagccgactgcattaccaacatcaaggagtttttaagaggatgctcgtctttg
aaagtggaggggtttgaaccagagtgcttatacactggtgagaattttggcaaggtgctg
accactttgatggcagtcaactttgccacacaagactgtgctgctgagagatgttcgcag
tccggtgcccactctcctagtcagtcgacatcttcacacacactctcctctgccaaaacc
aaaggctctctgcgtagacaatccaaatcagtggagatgtctgagaacggtggaggtggg
cagctgatggtgaaggctcgcttcaacttcaagcagaacaatgaggatgagctgtccttc
aataaaggcgacttgatccatgtgatgcggcaggaggagggggggtggtgggagggctcc
ctcaacaccaagactggctggtttcccagcaactacgtccgggagatcaaaccctgcgag
aagcctgtgtctcctaaaggaactcagctgaccaagaactactacagtgtggttgtacaa
gacatcttggaacatgagcgggaatttgtcaaagaactacaaacagtgctgagctgttat
ctacgacccctgcaagccagcgacaagctgagcagtgcagacagcgccaccctgtgtgga
aacctggaggagatactcaccttccagcagggactgtgtgcggctttggaggactgtacc
aaagtctctgaaggccagcagcgagtggcgggctgctatttaaacctgatgtctcagatc
aagactctgtatctggcttattgttccagccatccttcagctgtttgcatcctcactgat
cacagcgaggaactagacaagttcatggagagccagggagccagcgctccggggatcctg
gctctgaccaccagcctcagtaagcccttcatgaggctcgacaaataccccacgctgctg
caggagctggagagacatgtggaggaagctcacccagactatgctgacattgtgaaggca
acagcaacatgcaggagcttagtgacacaatgccaggaattgcgaaagcgtaggaacctg
gagctccagatcttgtcagagccggtgcggggctgggagggagacagcatgaagagcctc
ggtcacgtggcctacatgtcccaggtccacgtcaaaaatgggtccagtgaggaaaaagag
gagcgctatctaatgcttttccctaacatgctagtcatgctttccgccagtccccggatg
agtggctttatttatcagggaagactgccgctgaccggcaccacagtcacaagacaagca
gaggatgcagacaacgcccactatgccttggacatcacaggaagtgtgatcgatcgtgtc
acagtgttctgcagtagttcccaggagttacaagaatggctcgatcagcttcagcccttc
accaaagggagcagccctgcaggcacaatcttgaagactgtcgaaggcaagccactgagc
atggtcggcccgcccactcacctgtcccacctgggcagcctcagcgccgtcagccgtggc
cccctggagcccccaaagatcagcaagccctggtccctcagctgtctgcgccccgcaccc
cccctcaaaccctctgctgctctggggtacaaagagaggatgtcttatatcatgaaggac
tccagtaagagtccgcggccaatgaaaaagttcctgcctggcaacaggaagaaagagcgg
aagccgtctgatgatgagtttcacacgaggaaaagcacagtggcgctggaggaggacgct
cagattctgagggtgatcgaggcgtactgcaccggagccagcctgcttcagacaaccacg
ggtgctcgcttatcggtgcggaaagagtgcgtccctcaggtgctcctgccagaggaagag
aagatcattgtggaggagatgaagagcaatgggcagaccgttattgaggaaaagagcctg
gtcgatgctgtgtacgctttaaaggatgaggttcatgaactgaaaaaggagaataagtgg
atgaagcagtttctggaggaggagcagaaatctcgcaaggagctggagagagtggttcga
aaactggccaagcagaagaacgattgtgcttgggacgacggcgctcactga
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