KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117453550
Entry
117453550         CDS       T09629                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pgeo03036]
    117453550 (kdm3b)
Enzymes [BR:pgeo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     117453550 (kdm3b)
Chromosome and associated proteins [BR:pgeo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117453550 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2
Other DBs
NCBI-GeneID: 117453550
NCBI-ProteinID: XP_033948283
LinkDB
Position
10:23581263..23601737
AA seq 1781 aa
MGDSLELIGKRLFLLLDDGRSANGSEPEQAAWARDWLRGTVRAVSVIGLAAPEGGEATTT
SPAAGLTVFVEFENVVQSCSWVQVYDKGVKALLVEDSIVWANRSDGTGTAGAPTSSAAWP
ALVFRSLVDRVGLGSVVPVEYFGNKNFEFLSDNTTFQRFEVDKDLRHPLLLEQPSLQAAV
SSWRTDFELQEIFRKGSYTIQGRRVRVYQPEFEDYWASGLVSQHDPISHIMEITLDKGDE
TQMVDPRVIHVMLAEEENGRRRKDSDTMKGDSGRRRRTASEGEDDLNLKRFKGAGDTAAD
GQSCGDFNKTAVEGMGIWGGDSGERVSSTTKNGSSSERTFPQGRVSSPNTNSSLQMDQSN
ATPSRFPAHVKENGRPLSTQGAADSTTAVTHTPTPPPLKPAPSPFSTTSFPSLGQMPSLV
PGAPAPKSSSSPQTDREEASQSAYSKTAALVSPGPVTISWSHDSGPSVALSASVGFTPKA
PTWGSQTEGSKTASGFRMPQTGPSQTNGAPSTTTASQDTPRPFGFGFGGAKNETQSKQDQ
NLFIQCMTQSSGSSPSLAAGQTQSKDTNYFTAVSESLSKEPPSLFKSTASTEGQKKHEQP
KVPETHTAGNGVLNKSSSTFQGMASSAGGRGPGLSIGGLPAASGAQSTSKKSSNNGTSVG
GLGLQSGFNTSDSHQNLFLQASKEPANPFLAYGDKTAHTSFAGLSGAESQTLGSASDSKP
NLFTMAEPPKGILSSPFPALPAAASPSSSSSPVPTSSQRSQSEGTVAKEEQEVGEMPSST
SACPLFGSTGPGGIEDVPASFDQSTSQKFSLEDRGQSSKRDSGDSSCNSDLSDLSENEEG
PEKGQIPGRPPLPVKDAAMMQKTKVQGVAKGRPRNKPFKVGQSVLKDQSKVRRLKQSGES
FLQDGSCINVAPHLHKCRECRLERYRKYRTTGEDSDDDDPNVSCRFFHFRRLAFTRKGIL
RVEGFLSPQQSDSMAMGLWLPAPAVQEGLDLDTSKYILANVGDQFCQLVMSEKEAMMMVE
PHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRRNRPREDVDERPE
DEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYSIGDMVHSARGKWGIKANCPCTSRHTKS
LVRPSAPNGIPQQSASSSSGVLAAASAFGTTPKSEGETSAVKTETAQTAAPSDSGGGEHV
GSISNSTSGTSSPCNHTQSTAKESRSAGEGNSSALLWLADLATQKAKDDTKDSGSLRSMM
SQNSRPHFGLDSLSALSKPSASSPKLFNSLLLGSSMAQSKPEGSSLRDLLNSGPGKLPQG
PGESGVPFPSVFTSAGSDKLKSSLPNFLDHIIASVVETKKAEGRRTGASEGGELGLLGGR
KDGVMGLSVLEPHTSHSWLCDGRLLCLQDPSNSNNWKIFRECWKQGQPVLVSGIHKRLKE
NLWRPDAFSREFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIISKRLQDTEGHPMVLKLK
DWPPGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLNLAARLPNFFVRPDLGPKMYNAYGL
TSSEDRKVGTTNLHLDVSDAVNVMVYVGIPQIEGDPGKEADINGRKEVMTTIEEGDVDEM
TKRRVYEQQEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQVL
RRRLYEEYSVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQ
EFRHLSTTHTNHEDKLQVKNIIFHAVKDAVGTLKAHEPRRP
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgggggactctctcgagctgatagggaagcgtctctttctgctcctcgacgacggcagg
tctgcaaatggatccgagccggagcaggctgcctgggcccgggactggctgcggggcacg
gtgcgggcggtgagcgtcatcggcctggccgccccggagggaggagaggcgacaacaaca
agccctgctgcagggctgacggtattcgtggagtttgaaaatgtggtgcagagctgttct
tgggtgcaagtgtatgacaagggggtaaaagcactgttggtggaggactccattgtttgg
gccaatcgaagtgatggcactgggaccgccggggccccaacatcctccgcagcttggccc
gctctggtcttccgttccctggtggacagagtgggtttaggatcggttgttcctgtggag
tattttggaaacaagaattttgaattcttgtctgataacacaacttttcagaggtttgag
gttgacaaagacctgagacaccctttgctgttggagcagccctccctgcaggctgccgtc
tccagctggcgtactgactttgaactgcaggagatcttcaggaagggttcctacaccatt
caaggacgcagggttcgtgtgtaccagccagagtttgaagactactgggcctcaggactg
gtctcacagcacgacccgatctcacacatcatggagattaccttagataagggagacgaa
acccagatggtagatcctcgtgtgatacatgtcatgctggcagaggaggagaatgggcgg
cgaagaaaggacagtgatactatgaagggtgacagtgggcgcaggcgcaggactgcgtcc
gaaggcgaggatgacttgaacttgaagcgttttaaaggagcaggcgatacggcagctgat
gggcaaagctgcggcgacttcaacaaaacagcagtggaagggatggggatctggggcgga
gactccggcgaaagggtcagcagcacgaccaaaaacggaagctcgtcagaaagaaccttt
cctcaaggcagagtgtcgtcccccaacactaactcctcacttcagatggaccaatcgaac
gctaccccttctcgctttcctgcccatgtgaaagaaaacggtcgcccactctccacacaa
ggtgcagcagactccactaccgccgttactcacactcccactcctcctcccctcaaacca
gccccctctcctttctccaccacgtcttttccctcactaggccagatgccaagcctggtc
cccggagctccagcccccaagtcctcctcatccccccaaaccgaccgagaggaggcctca
caatcagcttattccaaaacagctgctcttgtttccccgggccctgtcaccatttcttgg
tcgcatgacagcggccccagtgtggcactctctgcgtctgtgggttttactcctaaagcc
cccacctggggaagccagactgagggctccaaaacggcgtcaggttttcgtatgccccaa
actgggccctctcagaccaatggagctccttctaccaccacagcctcccaggatactccc
aggccctttggcttcggctttggaggagcaaagaatgagactcaatccaagcaagaccaa
aacttgtttattcaatgcatgactcagagttctgggtccagcccaagcctagctgctggt
cagacccagtccaaggacaccaattatttcaccgcagtgtctgagagcctgagtaaggag
cccccaagccttttcaagtccacagcctccactgaagggcagaaaaagcatgagcagccc
aaggtgcctgagacccatacagcgggaaatggtgtgctcaataaatcgtcatcgaccttc
cagggcatggctagctctgcaggaggaagaggccctggtctgagcatcggtggtctccct
gcagcctctggagctcaaagtacttctaagaagagcagtaataatgggacttctgtggga
ggcttaggactgcaatctgggtttaatacttcagatagccaccagaaccttttcctgcag
gcctccaaagagcctgctaatccatttctggcatatggggacaaaactgcccacacctcc
tttgctggcctctcaggggccgagtcacagacccttggttctgcctcggacagcaagcca
aacctgttcactatggccgagccacctaaggggattctgtcttcccctttcccagcactc
ccagcagctgcgtcacccagctcttcatcttcaccagtaccgacctcatcacagaggtca
cagagtgaagggactgtggcaaaggaggagcaggaagttggagagatgccttcatccacc
tcagcatgccccttgtttgggagcaccggcccaggtggaatagaagatgtcccggcgtcc
tttgaccagagcacgtctcagaagttctccctggaggacaggggccaatcgtccaaacgt
gactctggtgactccagctgcaacagtgacctgtcagacctgagtgagaatgaagagggc
ccagagaaaggccagatcccaggacgaccaccactccctgtcaaggatgctgccatgatg
cagaaaactaaggtccagggggtagctaagggccgtccacgtaacaagccttttaaagtg
ggccagtctgtactgaaagaccagagcaaagtccgccgtctgaagcagtctggcgagtcc
ttcctccaggacggctcctgcatcaatgtggcccctcacttgcacaagtgccgcgagtgc
cgccttgagcgctaccgtaaatatcgtactacaggcgaagacagcgacgacgacgaccca
aatgtgtcctgtcggtttttccacttcagaaggttggctttcactcggaaaggtatactg
cgcgtagaaggcttcctgagtccgcagcagagcgattccatggccatgggtctgtggcta
cctgctcccgccgtccaagagggcctcgacctcgatacatccaagtacatcctggccaat
gtgggagaccagttctgccagttggtcatgtctgagaaggaggccatgatgatggtggag
cctcaccagaaagtggcatggaaacgagcagtgcgcggtgtcagagaaatgtgtgacgtg
tgtgagaccacgctcttcaacatccactgggtatgtcgtaagtgtggctttggagtgtgt
ctggactgctatcggctccgcaggaacaggccaagggaggatgtagatgaaaggcctgag
gatgaggttttctcttggttaaagtgtgccaagggccaaccccatgagccacagaacctc
atgcctacacagataatacctgggacagctctttacagcattggcgacatggtgcactcg
gcgagaggcaagtggggtattaaggccaattgtccttgcaccagccgacacaccaagtct
ctagtacgccccagtgccccgaatgggattccacagcagtctgcatcaagcagtagtgga
gtcctcgctgcggcttcggcttttggcaccaccccaaaatcagagggagaaacatcagca
gtcaaaacagaaactgcacaaacagcagcgccatcagacagcgggggcggagaacatgtt
ggcagtatcagtaactccaccagtggtacatcctccccctgtaaccacacccagtccact
gccaaggagtcacgctcagcaggggagggcaacagctcggctctgctctggctggcagac
ttggccacacagaaagccaaggatgacaccaaggattctggttcactccgctccatgatg
agtcaaaacagccggcctcacttcggcctggactcactcagtgccctttcaaagccttct
gcttccagtcctaagctatttaacagtctgttgctgggctccagcatggcccagtccaaa
cccgagggctccagtctccgggacctgctcaactccggaccggggaaactcccccagggg
cctggggagagcggggtgcctttcccctctgtctttacctcagcagggagtgacaagctg
aagagcagcctcccgaacttcctggatcacatcatcgcttcggtcgtggagaccaagaag
gcagaaggccgccggaccggggcctctgagggcggagagctcgggttgttggggggccgc
aaagacggagtcatgggcctaagtgtcttggaaccacatacctcccactcctggctctgt
gacggacgactcctctgcctacaggaccccagcaacagcaacaactggaagatcttcaga
gagtgctggaagcagggacaaccggtgttggtgtcggggatacataaacgtctgaaagag
aatttgtggcggcctgatgctttcagtagggagtttggtgaccaggatgtggacctggtc
aactgtagaaactgtgccatcatctctgatgtgaaggtacgagacttctgggacggcttc
gagatcatctccaagcgactgcaagacactgagggccatcccatggtattaaaattaaag
gattggcctccaggtgaagactttagggacatgatgcccacaaggtttgatgatctgatg
gataacctccctttgcccgagtacacaaaaagagacggccgtttaaacctcgccgcccgt
ctgcccaacttttttgtgcgtcctgatcttggacctaagatgtacaacgcctatggcttg
acctcctctgaagacaggaaggtgggaaccacaaatctccatctggatgtctctgatgcc
gtcaacgtcatggtctatgttggcatccctcaaatagagggagacccggggaaagaggca
gatatcaatggacgcaaagaggtcatgaccaccatcgaggagggcgatgtggatgaaatg
accaagaggagggtgtacgagcaacaggagaaacctggagctctctggcacatctacgct
gcgaaggatgcagagaagatccgagagctgctccgcaaggtgggagaggagcagggtcaa
gagaaccctccagaccacgaccccattcacgaccagagctggtacctggaccaggtgctc
cgccgcaggctctatgaagaatacagcgtccagggttgggccattgtacagttcttagga
gatgccgtgtttatccctgctggggcgccacaccaggtgcacaacctgtacagctgtatc
aaggtggcagaggactttgtgtctcctgagcacgtgaagcactgtttcagactgacccag
gagttcagacacctgtccactactcacacaaaccacgaagacaagctacaggtgaagaac
atcatctttcatgcagtgaaggacgctgttgggacactgaaggcccatgaacctagacgc
ccttag

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