Pseudochaenichthys georgianus (South Georgia icefish): 117453563
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Entry
117453563 CDS
T09629
Name
(RefSeq) catenin delta-1-like isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117453563
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT_2
Atx10homo_assoc
CTNNBL
Motif
Other DBs
NCBI-GeneID:
117453563
NCBI-ProteinID:
XP_033948299
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Position
10:19946416..19969004
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AA seq
915 aa
AA seq
DB search
MEQCESAAALLESVREQEVQFEQLTRALEDERRRVGLPATSPSTLGRPLPHTQNGRLGDA
DIERLKLIDSYINGTQYRMVDPAHGALDESYTPEDDSQEVHSVFSDEGTARRQDNGMKKP
ISRTVLPSDSMSIDGGLSVSGMGGYSATLDRSYRQAVPSDYPTATVPRNYHYAPVGGYDD
YRGGPPSEAYTSLSRGSHMDERYRPVDGYRTLDSGYRAPSRQQLDPYAAQPQVSRGMRAL
GSALEVRYGHGHYGLEDDQRSVGYDDYGMGPPPMHPGGYGTMPGLGRGPAAMDRRRLRSC
EDTLDGDVVGVDPYAWGVPMTMERGSMASLDSTLRKGPPGTWRQPELPEVIAMLNYRLDP
VKINAAAFLQHLTFKNDKVKSEVRRLKGIPSLVSLLDHPTKDVHHSACGALKNISFGRDQ
ENKIAIKNCDGVPALVRLLRKTHDQDLTDTITGTLWNLSSHDSVKMEIVDHALHALADEV
VVPHSGWERASHGGEESCKPRHLEWETALTNTAGCLRNVSSERSEARRKLRECTGLVDSL
MYVVQSQINRKDVDNKLVENCVCLLRNLSYHVHREVPGCERYAETAPVNQGPVPANKGGC
FGSRKGKDEWFSKGKKDGDDGSGDVVDIPKRTTPAKGYELLYQPEVVRVYTSLLRESKNP
SVLEAAAGAIQNLCAGRWTYGRYIRATVRLEKGLPMIAELLAHGNDRVVRAMSGALRNLS
IDNRNCQLLGLHAVPHLVANLPGGQSQSGRTLSEETVVSVLSTLTEVLGNSVEAAKTLRT
SQGIERLVLINKDGKRSEREVRGAGQVLQLVWAHKELRKPLEKDGWKKTDFMVNLSATNG
PSTRSNGTYEDSTTPLLDRGEKRDMIPLNDLGPEAYSTLDQRERRHTLDETTDTLPRGVY
GGRKGSLPLLDSYDG
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgagagcgcagcggctctgctggagtcggtcagggagcaggaggtgcag
tttgaacagctgacccgggcgctggaggatgagaggaggagagtgggcctccccgccacc
agcccctcgaccctgggtcgccccctccctcacacacagaacgggcgtttaggtgatgca
gacatagaacgactcaaactgattgactcgtacataaacggcacacagtacagaatggtg
gaccctgcacacggcgcgctcgacgagagctacacaccagaagacgactcacaggaagtg
cactcagtcttttctgacgagggaaccgcacggcggcaggataatggcatgaagaagcca
atctcacgcacagtcctgccctctgactccatgtcgattgacgggggcttgtcggtgtct
gggatggggggttacagcgccacactggaccgctcctacaggcaggctgtcccgtcagac
taccccacggccacagtgcccagaaactaccactacgcccctgtagggggatatgacgac
taccgggggggcccgccatcagaggcatacaccagcctgagcaggggctcgcacatggac
gagcgctacaggccagttgacggctaccggaccctggactcgggctaccgggcccccagc
cgccagcagttggacccgtacgcagcgcagccccaggtgagccgggggatgagggccctg
ggctcggcgctggaggtgcgatacggccatggccactacggcctggaggatgaccagcgc
agcgtgggatatgatgactacggcatggggcccccacccatgcaccccgggggctacggc
accatgccaggcctgggtcgcggccccgctgctatggacagaagaagactgaggagctgt
gaggatactttggacggtgacgtcgttggagttgacccctatgcctggggcgttcccatg
acgatggagaggggcagcatggcttcactggacagcacgctgaggaagggtccgcctggt
acatggagacagccggagctgccggaggtcattgccatgttgaactaccgcctggacccc
gtcaagatcaacgctgccgcattcttgcagcacctcacattcaaaaatgataaggttaag
tcagaggtgcggcgcctgaagggcatcccgtccttggtgtcgctgctcgatcaccccact
aaggatgtgcaccactcggcctgtggagcactaaagaacatttcatttgggagggaccaa
gagaacaagatcgccatcaagaactgcgatggagtgcccgctctggtccggttactgagg
aaaacccacgaccaggacctcaccgacacgatcacaggcacattgtggaacctctcgtcc
cacgactcggtaaagatggagatcgtggaccacgccctgcacgccctcgccgacgaggtg
gtcgttcctcactccggctgggagcgagcgagccacgggggggaggagagctgcaagcct
cgccatctggagtgggagaccgccctgaccaacactgccggctgccttaggaatgtgagt
tcagagcgcagcgaggctcggcgaaaattgcgggaatgcacaggattggtggattctctt
atgtatgttgtccagtcacagataaaccgcaaagatgtggataacaagttggtggagaac
tgtgtctgcctcctgaggaatctttcctatcacgttcatcgtgaagttcctggctgtgaa
cgttacgcagagaccgcgcccgttaaccaggggccggtccctgccaacaaagggggctgc
ttcggctctcgaaagggcaaagatgagtggttttcaaaaggaaagaaggatggagatgat
gggagcggagatgtggtcgacattccaaagaggacaacacctgccaaaggttacgagctg
ttgtatcaaccagaggtggtccgtgtttacacatcgctgctcagagagagcaagaacccc
tcggtgctcgaggctgcagctggggccatccagaacctgtgtgccggccggtggacttat
ggtcgctacatcagggccacagtgcgtctggagaagggtctccccatgatagcggagctg
ctggctcatggcaacgaccgcgtggtgcgggcaatgtccggagctctgaggaacctctcc
atcgacaaccgcaactgccaactgctcggtttgcacgccgtgcctcacctcgtggccaac
ctgcccggaggccagagtcagtcggggcgaactctatcggaggagacggtggtgtctgta
ctgagcacgctcactgaggtgctaggcaacagtgtggaggcagcaaagactctccgaacc
tcacagggcatcgagaggctggtgctcatcaacaaggacggaaagcgctcggagcgggag
gtgcggggggccggccaggtgctgcagctcgtctgggcgcacaaggagctccgcaagcct
ctggagaaggacggctggaagaagactgacttcatggtcaacctcagcgccaccaacggg
ccgagcacccggtccaacggcacctatgaagacagcaccacgccactgctggacagaggg
gaaaagagggacatgattcctctaaatgacctcggccctgaggcgtactctacactggac
cagagggagaggagacacactctggatgaaaccacagacactttaccgcgaggggtgtat
gggggcagaaaggggtccttgcccctgttggactcctacgatggttag
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