KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117453578
Entry
117453578         CDS       T09629                                 
Name
(RefSeq) synaptopodin isoform X1
  KO
K21112  synaptopodin
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117453578
SSDB
Motif
Pfam: Calsarcin
Other DBs
NCBI-GeneID: 117453578
NCBI-ProteinID: XP_033948321
LinkDB
Position
10:26862627..26880397
AA seq 1146 aa
MEMEKGHTSIRRGVSWSPGGLRKPLQATQNTPGTECNASWETTGFNKEQMSRKTNLTRSA
SLSEKELKEARVRSQIIAAQLTVPSNSSSRGVQLFNRRKQRVSAFTLESCGEGSGGDGPE
NVKTDPSSNKITWAEKSTEEKDRDLNFKNSKPLLSPPGRAHSVGDIMEEPAKDFYKVDEM
EDSVIQERHFLPVKEEQEEEEEARDKLSVELEDKVKDEIPPGSNNTDPVVMRQAECEAEI
NEGYTGPIRPGKLHNGCHSTSGPERVLVPTTKQTNTIINRTARPFFSPLTVQSPESSSPV
MDVPPPPSYDTPPLPVYTAPQPSAFSPLPPPPSYPTPPLPAFTNQPPQNFYSSPPLMSPV
LSPPPPQFPVSSVSQFPPMPHYGPPKVPKPSTFVPQPAQERKSMTPIKTGILEEGAARRG
NRKSMFTFKEKTVVAPNPELLSLVQGVDERKKHGHISVPEPVSEEELLALGAEASNFLAK
EEDRAEEERAPEWASSLKASRTRPRAEHVPDHSLTNVSGKGAELFAKRQSRMEKYVIEKQ
NSGQMRSPSPTMSLPPSWVYPANMPGRVKAIAKDSDMGAQLSEKLKAQQAVQQKPRQKAP
EPEPIAEPPLENGCSKLEMDLSRHRPYQLSSSLFILNPVKDPLSTLPKGAPQSKNLISNQ
PFSRQTSLPHNPPSHFHTQSMSPQLPLSPTRREAEYPPNPSYGQPRMSSPMSAFSPERVS
SPRSGVQAPRPVFSAKKAGIAPQTPTDSSPVESRSQAPTPTRTPSLTRRFSSPEGPAPGT
WAPSLQANQSSIAISSGSVTSPVSSTRGTRYQSPVASQNIQLSMVTSSTAPRTSQTFPAT
SSRSSPWGSRCQSPMVSQNTQSSSNTSIPGYRPSQTPTTTTPFSPPWGSRCQSPLVNQCK
QSSTVSSTSKPTPTSTAASPRSPPLGSRCQSPKVSQKSHSSTITVVPTSRPTQILTATSP
VSPPWSSRPQSPALSQTSLSFSATKPLHTFSATSPVPPPKDSRCMSPIVDNQDSKANHRL
LAKNIINAAKRKNSPSSGALSGHSLPISPLGNSHHGYDCNKPPMSPFQSRAFGAQSPTFT
SPPPTPTQRICSPVRLYNTRSLTDSDASVESEDSGLRSPGLHSYNTCPRGWGGSLRVKRS
TVSTDL
NT seq 3441 nt   +upstreamnt  +downstreamnt
atggagatggaaaagggacatacgtctatccggagaggagtgagctggagtccaggagga
ttgaggaaacctctccaggcaacccaaaacactcctgggacggaatgcaatgcatcatgg
gagacaacaggattcaacaaagaacagatgagccggaaaacaaatctgacgaggagtgcc
agtctgtcagagaaggagctaaaggaggcccgtgtcaggagtcagatcatcgctgctcag
ctcacagtcccttcaaactccagctccagaggtgtgcagcttttcaaccggcgcaagcaa
agggtcagcgcctttacactcgaaagctgtggagaggggtcagggggtgacggacctgag
aatgtgaagacagacccctctagtaacaaaataacatgggcagagaagagcactgaagaa
aaggatagagacctgaactttaagaacagtaagccactcttgtcaccacctggtagggca
cattcagtaggcgatatcatggaggaaccagctaaagatttctacaaggtagacgaaatg
gaagacagtgttatccaagagagacatttcctacctgtcaaggaagaacaggaggaagag
gaagaggcaagagataaactctcagtggagcttgaggacaaagtcaaggatgagattccc
cctggaagtaataatactgatccggttgtgatgagacaggctgagtgtgaggcagagata
aatgagggctacacagggccaattcgccctggaaagcttcataatggctgccacagtacc
tctgggcctgagagggttcttgttccaacaaccaagcagaccaacaccatcatcaatcga
acggccaggccttttttctcaccattgacagtgcagtcaccagagtcctccagccctgtc
atggacgttccccctcctccttcttacgacactcctcccctccctgtttacactgctcct
caaccttcggcgttctcaccactgcctccgcctccgtcatatcccacacctcctctgccg
gcttttacaaaccagccgccgcagaacttctactccagtccacctctgatgtctcccgtc
ttgtctcctccacccccccagttccctgtgtcttctgtctctcagttcccacccatgccc
cattatggccctcccaaagtcccaaagccctccacctttgttcctcagcctgctcaagag
aggaagtctatgacaccaatcaaaacgggaatacttgaggagggtgctgctagaagaggg
aataggaagtcaatgttcaccttcaaagagaagacagtggtagctccgaaccctgagctt
ctctctctggtacagggggtggatgaaaggaagaaacatggacatatatctgtgcctgag
ccagtatccgaggaagagttgctggcactgggtgctgaggcctccaacttcctcgccaag
gaagaggacagggcagaagaggaaagagctccagagtgggcttccagcctcaaggcctcc
aggacccgtcccagggcagagcatgtgccagatcatagcctcaccaatgtatcaggaaag
ggggctgagctgttcgcaaagcgacagtccaggatggagaaatatgtgattgagaagcaa
aattcgggacaaatgaggtctccttctcccactatgtctctgccaccatcttgggtgtac
ccagcaaacatgcctggcagggtgaaagccattgcaaaagattctgacatgggggctcag
ctttcagaaaaactaaaggcccaacaagctgtccagcaaaaaccaagacaaaaagcccca
gagccagagccaatcgcagagcctccgttagaaaatggttgctctaagttagagatggac
ttgtcaaggcaccggccttaccagctttcctcttccctcttcatcctcaacccagtcaag
gacccccttagtaccttacccaaaggagcaccacagtccaagaacctgatatcaaaccag
cctttctctagacagacttccttacctcataaccctccttctcacttccatacccagagt
atgtcaccacagctgcccctcagccccacaagaagagaagctgaatatccaccaaatcca
tcttatgggcagccaaggatgagctctcctatgtcggccttctctccagagcgagtgtcc
tctccacggtcaggggtccaggcaccaaggcctgtgttttctgcaaagaaggcagggatt
gcaccacagacaccaacggattcctccccagttgaatcccgcagccaggctccaacacca
accaggacgcccagcctgaccagacgtttcagcagcccagagggcccggcacctgggacc
tgggctcccagcctccaagctaaccagtcctccatcgccatctctagcggctcagtaact
tcccctgtatcctctaccagaggtaccagataccaatcccctgtggccagtcagaatatc
caattgtccatggtgacctccagtacagcacccagaacctctcaaacatttccagccact
tcttcacgctcttctccttggggttcaagatgtcagtcgccaatggttagccagaatacc
cagtcttccagcaacacctctattcctggttatagaccatcccaaacacctacaactact
acccctttttctcctccttggggttcaagatgccagtccccgttggtgaaccagtgtaaa
caatcttccactgtatcctctacatccaaaccaaccccaacatctacagctgcatcacca
cgctctcctcctttggggtcaaggtgccagtcccctaaggtgagccaaaaaagccattct
tctacaattaccgttgttcctacatccagaccaacccaaatattgacagccacctctcct
gtgtctcctccttggagctcacgtccccagtctcctgcactctcccagactagtttatcc
ttctccgccactaaacctctgcacacattttctgcaacctctcctgttcccccacccaaa
gacagtcgctgcatgtcccccattgttgataaccaagactctaaagccaaccaccgcctc
ctggccaagaacatcatcaatgcagccaaacgcaaaaacagcccctcctctggagcacta
agcggccacagcctccccatctccccactgggaaattctcaccatggctacgactgtaac
aaaccacccatgagtcctttccagtcgcgggcatttggggcccagtcccctaccttcacc
agccctcctccaaccccaacacagaggatctgttcacctgtgaggctctacaacactcgc
tccctcaccgactctgatgcctctgttgagtctgaagactcaggcctgcgatcgcccggc
ctgcactcctacaacacctgtccccgtggctggggcggcagcctgagagtgaagcgaagc
actgtctccacggacctttga

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