Pseudochaenichthys georgianus (South Georgia icefish): 117453644
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Entry
117453644 CDS
T09629
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-B
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117453644 (rlim)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117453644 (rlim)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117453644 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
Trypan_PARP
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117453644
NCBI-ProteinID:
XP_033948425
LinkDB
All DBs
Position
10:24594488..24601155
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AA seq
719 aa
AA seq
DB search
MEGSDSAEQSGGGEQPESQRRRQLDRLGREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEV
TQDELLSRLQQIKDGPEQPNSTPSAPSTESGVDPVEPPENSEDPANGDSLLDWLNTVRRT
GNTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPHESPQET
PQATSEETPESQEMVSNVEPLVVEAEPQVPMETDVVEEPVVEEVALIVEPEPEPEPELDP
EPEQEPEQEPEPEQEPEQEPEPEQEPEQEPEPEPEPELEEVVSQEILGEPLLSTAALPVQ
PPQPPLSPSPRRGQRRARSRSPEPRRTRARTARSRSPLNLDRLDGLPNPRHAHSTQGLNP
ATNAPPVLQVEGSSRTRQHVLSRQSTADVDVQPSRASAEVVPEAQPVGAQEGEAAAGEGA
AAGEGAAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFR
RTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDS
DSSDSNRGATTPADLAEALNNPEANPAAAPVADVEEPPVAAGVRARTAETDTEEGVVTAP
PASAGRVRPLPPISLAEPSSLPFLRLAHFFLLNDDDEDQPQGLTIEQIDNLSMRNFGESD
ALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRSAVLVSANRESVV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtccgacagtgccgagcagagcggcggcggggagcagccagagtctcagcgc
aggaggcagctggaccgcctgggcagggaggaggccttctaccagtttgtcaacaatctc
agtgatgaggactatcggctcatgagagacaacaatcttttaggcaccccaggagaggta
acacaggacgaacttttaagtagacttcagcaaatcaaggatggtccagagcagccgaat
agcacccctagtgcccccagtactgaaagtggagtggatccagttgaaccaccagaaaac
tcggaggatcctgcaaatggggatagtctcttagactggctgaacacagtgaggcgcaca
ggcaacacaaccagaactggtcatcgtggaaaccagtcatggcgggctgtgagccagacc
aacccaaacagtggggatttccgcttcagtctggaaatcagtgtgaaccgcaacctggct
gaacagcaggcagctgctgaaggggagcaggaatctccacacgaatctccacaggaaact
ccgcaggcaacttcagaagaaaccccagagagtcaagaaatggtgtctaatgttgaacca
cttgtggtggaggctgaaccacaggtacccatggagactgacgtggtggaagaaccggtt
gtagaggaagtggctttgatagtcgagcctgagccagagccggagccggagctggatcca
gagccagagcaggaaccggagcaggaaccagagccggagcaggaaccagagcaggaacct
gaaccagagcaggaaccagaacaggaaccagaacctgaaccagagcctgaactagaagaa
gttgtttcacaagagattttaggagaacctctcctctcaactgccgccctgccggtacaa
ccaccacaacccccactctctccttctccacgcagaggacagcggagagcccgcagccgt
agtccagaaccacgcaggaccagggcgcgcacggccaggagccgctcccctctcaacctg
gatcgcctggatggcctcccgaatccacgtcatgctcacagcactcaaggcctcaaccct
gccaccaatgctccccctgtgcttcaagtggagggcagttcacggactcgacaacacgtt
ctttctaggcaaagcactgctgatgttgatgttcagccatctagggctagtgcagaagtg
gtcccagaggcccaacctgtaggagctcaggaaggagaagctgctgcaggggaaggggcc
gctgcaggggaaggggccgcagcagggcgccgtccccctaccattatgcttgatctccag
gtgcgtcgtgtgcgtccaggcgaatatcggcaaagagacagcattgctagccgcacccgt
tcacgctcccagaactcaaacaacacatttctttatgagagtgagcgtggtggatttcgc
aggactttctcacgctctgagcgtgctggggtgaggacctacgtcagcactattcgcatc
cctatccgaagaatctctgatgccggtttgggggaggccacctcgatggctctccaatct
atgattaggcaaataatgactggttttggtgaactcggctacctcatggactcagactcc
gattcgtcagattcaaaccgtggagccaccacacctgcagatctggctgaggccctcaac
aacccagaagccaatcctgctgcggctcctgttgctgatgtggaagaaccccctgtagct
gcaggagtcagagcaaggacagctgagactgataccgaggagggtgttgtcactgctccc
cctgcctcagctggcagggttagaccactaccacctatcagcctagcggagcccagctca
ttgcctttcttgcggcttgctcacttctttcttctaaatgatgacgatgaggaccagccc
caagggctgaccatagagcagattgacaacctctcaatgcgcaattttggtgagagtgat
gccctgaagacttgcagtgtctgcataacagaatatgcagaaggtaacaagctacgtaag
ttgccctgctctcatgagtaccatgtgcactgcattgatcgctggctatctgaaaactcc
acttgccccatctgccgcagtgctgtcttggtgtcagccaacagagagagtgttgtgtag
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