Pseudochaenichthys georgianus (South Georgia icefish): 117453655
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Entry
117453655 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 11-like
KO
K20308
trafficking protein particle complex subunit 11
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117453655
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117453655
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Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
Motif
Other DBs
NCBI-GeneID:
117453655
NCBI-ProteinID:
XP_033948447
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Position
10:complement(41661942..41678649)
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AA seq
1123 aa
AA seq
DB search
MMRGSQWELPPELCCRPMAFVALXGLDVVYNAVHRAIWDAFCVNRRAEQSVPSLSSPPGD
HEYPKCRTKRTSYEWYIPKGILKTGWMHKHLNLVPALVVLFYELDWDDPTWKEKQSECAT
KVEIVRTSLQGRNTKVAVVLIQKKTPLPPGEDLVASERAATLCNACDLSGKSLFVLPHTD
HLVGYIIRLENAFYEHSQTYYYTEIRRVKSHKEFLNKTTHQLLFVRHQFKIAFFSELKQD
TQNALKYYRTAYSLVHELRAHETNMLEIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHI
DLCKKKIGSAELAFEHSAWMSKQFQSFGELFDEAIKLGLTAIQTQNPGFYYQQAACYSQD
RKQLAQQLCQASLPSPDPVDTQSGGLDFYGQRAWRQGHQSIDPPDAEKEKTGILAQQMKE
RDVPHSELIIALLSNAVAQFKKYKCPRMKSHLMVQMGEEYYHAKDYTKSLKLLDYVMCDY
RTERWWALLSAILTTALRCAYLMASVKDYIIYCMELLGRASTLKEEQKLRIEKNLLKVLK
NEVPEAEPECDPSSVTAARSLWSDRTAPAGSNELTMEVQDYIPFIQCKARFHAPSFHVDQ
PVQLKVFLRADCPHPVSFNKLSVSLSNQEYNQWCVVESAGEESMSLVPGKTQCYDFSFVA
KTEDVGKKIEMTGVEVMLGSDRGRCVFLSWRGAGGDVASTHEALQASRSSRRWGRGVQAR
QEPDWDSLTLQPSTMVISRVPKVSVQLSHQPPALNNEMYCINLTVQSQEEGVAKDVKLTA
GLKPGQDATLGQTTHVTLDGSKVCDDSAPALLPDLPLGDLHPGQKLEISVHVKCVSTGPR
VFLFHVAYSIDTSVEGRQIVCKCHKDETVTIETVVPFEVSAKFVSTKFEQLDRLAVDIPF
LLMTDILSTSPWPLLLASSSLQLLTMTSNSPQLQSQLQEVVLQTDESASECFCLRVPPMN
NNNNNTVATGQYLISWRRKSSGVDSPLIQTTVTLSHVILETVPLYIHADLPSFGRVRESL
SVRYHIENRTSLVQEVEMAVEPSDAFMFSGLKQVRLRILPGSEQQMLYNYYPLMAGYQTL
PQLNISLPRCLTANTHSLRRFLPQRIFVKPQGRQLDEASIAAA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaggttcccagtgggagcttcctccagagctatgttgtcgtcccatggccttc
gtggctctanacggtctggatgtggtttataacgccgtgcaccgggccatctgggacgcc
ttctgcgtcaaccggcgagctgaacagagtgtcccatctctttcaagtcctccaggagac
cacgaataccccaaatgtcgcactaagcggacttcctatgagtggtacatccccaaaggc
atcctgaaaacaggatggatgcataaacacctgaacctggtaccagctctggtggttctg
ttctacgagctggactgggacgacccaacatggaaggagaaacaatctgaatgtgccact
aaggtggagattgtaaggaccagccttcagggcaggaacaccaaggtggctgtggttctg
atccagaagaagactcctctccctccaggagaggacctggtggcttcagagagagcagcg
actctttgtaacgcctgtgatctgtccggaaagagtctgttcgtgctgccacacaccgac
cacttagtgggctacatcataaggttggagaatgctttctatgaacattctcagacatac
tactacactgagatccgccgagtcaaatcccataaagagttcctcaacaagacgacacat
cagctgctgtttgtcagacaccagtttaagatcgccttcttcagtgagctgaaacaggac
acccagaatgctctcaagtactacagaactgcatacagtctggttcatgagctgcgggcc
cacgagaccaacatgttggagatcaaaacgatggctggattcatcaactataagatctgc
cgtctgtgtttccagcacaacactcctctagacgccatcgctcagttcaggaagcacatc
gacctgtgcaagaagaagatcggcagcgctgagctggccttcgagcactctgcatggatg
tctaaacagttccagtcgtttggcgagctctttgatgaagccataaagctgggtctgacg
gcaatccagacccagaaccctggcttctactaccagcaggcggcctgttacagccaggac
cgcaaacagctggcccagcagctctgtcaggcgagtcttcccagccctgacccagtggac
acccagagtgggggactggacttctacggccagagggcatggagacaaggacaccagagt
atcgatcctccagatgccgagaaggagaagacggggattctggcccagcagatgaaagag
agagatgtgccgcactctgagctgattatagcactgctcagtaatgctgtcgcccagttc
aagaagtacaagtgcccccggatgaagagccacctcatggtgcagatgggagaggaatac
taccatgctaaagactacaccaagtccctgaagctgctggactacgtgatgtgtgactac
cgcacagagcggtggtgggccctcctgagcgccatcctgaccacagcgctgcgctgtgcc
tatctgatggccagtgttaaagactacatcatatactgcatggagctgctgggccgcgct
tcaaccttgaaggaggaacagaagttgaggattgagaagaacctgctcaaagtcctgaag
aacgaggtccctgaggctgagccggagtgcgacccctcctccgtcactgcagcccgctcg
ctgtggagcgaccgcacggccccggccggatccaatgagttaaccatggaggtgcaggat
tacatccccttcatccagtgcaaggccaggttccacgctcccagcttccacgtggaccag
cccgtccagctgaaggtgttcctccgagccgactgtcctcaccccgtgtccttcaacaag
ctgtccgtcagcctcagtaaccaggagtacaaccagtggtgtgtggtggagtctgccggg
gaggagagcatgagcctggtgcccgggaagacgcagtgctacgacttcagcttcgtggca
aagactgaagacgtcggcaagaagattgagatgacaggtgttgaagtgatgctgggcagt
gaccgtggccgctgtgtgttcctgagctggaggggggcgggcggagatgtggcctctacc
catgaggccttgcaggctagcaggtcgtcacggcgatgggggcggggggtgcaggcgcgg
caggagccggactgggacagcctgaccctgcagcccagcaccatggtcatctcgcgagtc
cccaaggtctctgtgcagctgagccaccagccgccggctctcaacaacgaaatgtactgc
atcaacctcactgtccaatcacaggaggagggcgtggcaaaggatgtcaaactgacagct
ggcctcaaaccaggtcaggatgccacgctgggtcagaccacacatgtgaccctggacggc
tcaaaggtgtgtgacgacagtgcccctgccctgctgccggacctgcctctcggagacctg
cacccgggccagaagttggagatctccgtacatgtgaagtgtgtgtcgactggaccgagg
gtcttcctcttccacgtggcctacagcatcgacacctcagtggaaggacgtcagatcgtc
tgcaaatgccacaaagatgagacggttaccatagagacggttgtcccatttgaggtgtct
gcgaagtttgtgtccaccaagtttgagcaactggaccggctggccgtggacatccccttc
ctgttgatgacggacatcctgtccacgtccccctggcctctgctgctggcctcctcctcc
ctgcagctgctcactatgacctcaaactcaccacagctccagtcacagctacaggaggtt
gttttgcagactgacgagtctgccagtgagtgtttctgcctgcgggttcccccaatgaac
aacaacaacaacaacactgtagctacaggacagtacctgatatcatggagaaggaagtcc
tccggtgtggacagtccactcatccaaaccacggtcactctgtctcacgtcatcctggag
acggtccctctctacatccacgctgatttaccatccttcgggcgagtccgagagtccctt
tcagtgcgctaccacatcgagaacagaacgtctctggtgcaggaggtggagatggctgtg
gagccgtcagacgccttcatgttctccggactcaagcaggtgcgtctgcgcatcctccct
ggctcggagcagcagatgctctataactattaccctctgatggctggttaccaaacacta
ccacagctcaacatcagcctgccgcgctgcctgaccgccaacacacactctctgagacgc
ttcctgccccaacgcatcttcgtcaagcctcagggtcggcagctggatgaggcttccatc
gctgcagcttga
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