Pseudochaenichthys georgianus (South Georgia icefish): 117453711
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Entry
117453711 CDS
T09629
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117453711
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
117453711
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
117453711
NCBI-ProteinID:
XP_033948536
LinkDB
All DBs
Position
10:7735448..7857872
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AA seq
1249 aa
AA seq
DB search
MASPVADIGQSHQHPPVSEAAADSAFQEAQTWIEAVTGRCFGDKDFRGGLENGILLCELL
SSIKPGLVKKINRLPTPIAGLDNLSGFLRGCEELGLKGSQLFDPGDLQDTSTRPTAKGSD
CSRKLKNVLITIYWLGRAANGCTSYNGPTLDLKEFDGLLSQMRKEAEEAESPIRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVLVPRGSSDGRGSDSESDG
PPHRKMPDVRKDDMSTRRTSISEPRTAMPFNQYLPNKSNQSGYVPTPLRKKKNDKEDGAR
KSWSTATSPVGGDRPFSTPARSCSEEFFHHSTTPVAKSAAVSPVASGKHPPVSEPEEAAV
GTGAAGVPLAEDAEKQVGQTLTSPNTTNPPHFLPVPAAMVTTDTGRRKGRALSESGDPKE
GSTLSESGLPATFSRTHSVSEDPQSVSMIDMRDEEEAMLQPHSQVRHELMLNQYNEMKEE
DDHWQDDLARWKNRRRSISQDLIKKEEERKMMEQLMSGEICTSHRRKSIKTYREIVQDKE
RRELELREAYRRARTPEEASAILQHYAQRFSISESVMERLQLPNILDRSISADPSLPISL
SPMTPDPFDVDPHGPLRYLRQQSAPAPKFTSTLEARVEEFPKEPSHQRPQIRSRSSEPPS
NRTLSPKPVPLLTPKPYFQPRPSAGGPWPSKADALLRVNGDVGRDDVCTTPERQGRESPP
QYQASPSITSSSTVDVPSSAASQTHTSTRGGSPVATNAREEQSGTEPASKDAQEQKVIEN
LTQPSRPTSLPSELQKPEESFEKTGSQAAAEEEKSNAAAQQAPPTEAKQEQQTEPSGQNV
SNLVPSGVSTKHSQPIILQTIVPSSLEASQRRGNVPSLAAPESFEYHPPRETAAEFANSV
RSSLTTSNPKLRWDFFVPPEDMEKDLRGNVSGPGLPQARPGDRWSWDPDEERKRQERWQQ
EQERMLQEKYRREQEKLKEEWEKAQREVAEEGRKYHEEERRILEETVAPLTPRSSSLTSP
TRGEISSSSEPQDTIVRSLADWERKQELLESQLRGSTESVEWKRRENDRTSDISTADDSM
KTARSLLSQSSSQADALGQSLQNGQKLPVMTNKTSTPVKKPEETPADSNQLSKAAGDRRS
APIENNMCRSSSKPPAACSPPPDTLPPAPNRSVSGKKLCSSCGQALGKGAAMIIETLSLY
FHIQCFKCGVCKGLLGDTTTGTDVRIRNGLLNCHPCYTRSRSAGQPTTL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggttgcagacataggacagtctcatcagcatccccctgtcagcgaggca
gcagcagactccgcgtttcaggaggcgcagacatggatagaggctgtgacaggaagatgt
tttggtgacaaggacttcagaggcggtttggagaatgggatactgctgtgcgagttgctg
agctccatcaaacccggcctggtaaagaaaattaacagacttccaacacccatagctggc
ctggacaacctgagcgggtttcttcgaggctgtgaggagttgggactgaaaggctcccag
ctgtttgaccctggagacctgcaggacacgtcaacacgccccactgccaagggaagtgac
tgcagccgaaaactgaagaatgttctgatcaccatctactggttgggtcgtgctgccaac
ggctgtacctcctacaacggtcccacgctggacctgaaagagtttgacggcctgctgtca
cagatgcgaaaggaggcggaggaggcagagagcccgatacgcagcatccgggacagcggc
tacatcgactgctgggactctgagcgcagcgactccctctccccgccccgccacggccgc
gaggactccttcgacagtctggactccttcggctcacgctcacgacagaccccgtcgccg
gatgtcctggtcccccgcggcagcagcgatggccgcggcagcgactcagagtccgacggc
cccccccacaggaagatgccagacgtgcgtaaggacgacatgtcgacacggcggacgtcc
atcagcgagccgcgcaccgccatgcccttcaaccagtacctgcccaacaagagcaaccag
agcggatacgtgccaacgcccctccgcaagaagaagaacgacaaagaggacggggcgcgc
aagagctggagtactgcgacctcacctgtagggggagacagaccgttcagtactccagct
cgctcgtgctcggaggaattcttccaccattcgacgactccggtggctaaatctgccgca
gtgagccccgtcgcctcggggaagcatccacctgtgagcgagccggaggaagcggctgtg
gggacgggagccgccggtgtcccgttggccgaagatgcagagaaacaggtcggccaaacg
ctcacctctcccaacaccacgaatcccccgcacttccttcctgtgcccgctgccatggta
acaaccgatacaggccggcggaagggacgggcgctgagcgaaagtggcgacccaaaagaa
ggaagcactttgtcggagagcggtcttcctgcaacattcagccgcacacacagtgtgtca
gaggacccacagagtgtgagtatgattgacatgcgagatgaggaggaggccatgttgcag
ccccacagtcaggtgcgtcatgaactgatgctcaaccagtacaacgagatgaaggaagaa
gacgaccactggcaggatgacctggcccgatggaaaaatcggaggaggagtatctcccag
gacctgatcaagaaggaggaggaacgcaagatgatggagcagttgatgtcgggagaaatc
tgtacctcccataggaggaaaagcatcaagacatacagagagatagtgcaggacaaggag
cgtcgtgagcttgagctgcgggaagcgtacaggagagccagaactccagaggaggcgtcg
gccatactccaacattacgcccagcgcttctccatcagtgaatccgtcatggagcgccta
cagttgccaaatatcctggaccgcagtatatctgctgatccctctttacccatctccctc
tccccgatgacccctgacccctttgacgttgacccccacgggcccctgaggtatcttcga
cagcagtcggccccggctcctaagttcacgtctacactggaggcgcgggtggaggagttt
cccaaggagccctctcaccagcggcctcagatccgctcccgctcgtctgagccgccgtcc
aacagaaccctgtcgcccaaaccggtgcctttgctgacgcccaagccttacttccagccc
cgaccctcagcggggggaccatggcccagcaaggctgatgctttgctccgggttaacggc
gacgtaggacgtgatgacgtttgcaccactcctgagaggcaaggaagggaatctcctcct
cagtaccaggcgtctccctccatcacgagcagcagcactgtagatgttccctcgtcagca
gcctcacaaacacacacctcgaccagagggggaagcccagtggcgacgaacgccagggag
gaacaaagtggcacagaaccggcttctaaggatgcacaagaacagaaagtcattgagaat
ttgacgcaaccaagccggcccacatcactcccatcggagctgcagaagccagaagaaagc
tttgagaagacaggaagtcaggctgctgcagaggaggagaagtcaaatgctgcagctcaa
caagcgcctcccacagaagccaaacaagaacaacaaactgaaccatctggccaaaacgtc
tccaacctcgtcccgtcaggagtcagcacaaagcatagtcagccaattattttacagacg
attgtgccaagttccctggaggcgtcacagagaaggggaaacgtaccgagcctagccgca
cctgagtcatttgaatatcacccgccgagggaaactgcagcagagtttgcaaacagtgtc
aggtcttcgctgacaaccagcaaccctaagttacgctgggacttcttcgttccaccagaa
gacatggagaaggatctgcgtggaaatgtgtcagggccggggttgccccaggccaggccg
ggggaccgctggtcttgggacccggatgaggagcgaaagcgtcaggaaaggtggcagcaa
gagcaggagcgcatgctgcaggaaaagtaccggcgtgagcaggagaagctgaaggaggag
tgggagaaagcccagagggaggtggcagaggaggggaggaagtaccacgaggaggagcgt
aggatactggaggagacggtggcgcctctgactccccgctcctcctccctgacctctcca
acccgaggggagatctcctccagctccgagcctcaggacaccatcgtgcgctcgctggcc
gactgggagcgcaaacaggaactgctggagagccagttgagggggagcacagaaagtgtt
gaatggaaacggagagaaaacgacagaaccagtgacatcagcactgctgacgacagcatg
aaaacagccaggagcttgttgagtcagagcagcagtcaggcagacgctctcggtcagagt
ctgcagaacggccaaaaacttcctgtgatgacgaacaaaacctcgactcctgtgaagaaa
ccagaagagactccagcagacagcaaccagctcagcaaggctgcaggagacaggaggagt
gctcccattgaaaataacatgtgccgcagctcatcaaaaccccccgcagcatgctcccca
cctccagacactctgcctccagcgcccaacaggtctgtcagtgggaagaagctgtgctcc
agctgtgggcaggcgttagggaagggggcggccatgatcatagagaccctcagtctgtac
ttccacatccaatgctttaagtgcggggtgtgtaagggactgttaggagacacgaccacg
gggacggacgtccggatcagaaacggcctcctcaactgccacccgtgctacacccgctcc
cgctcggccggacagccaaccacgttgtga
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