Pseudochaenichthys georgianus (South Georgia icefish): 117453714
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Entry
117453714 CDS
T09629
Symbol
pdlim7
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117453714 (pdlim7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117453714 (pdlim7)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117453714 (pdlim7)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117453714
NCBI-ProteinID:
XP_033948544
LinkDB
All DBs
Position
10:complement(26447042..26480115)
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AA seq
437 aa
AA seq
DB search
MSGEHIEGQEAMNIYSVNLSGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAAQAGVGVGDW
VVSISDTNAEDMTHVEAQNQIRAATDSLTLTLSKAFKAGEQKDSLAPASVPPKYSFAPST
TINKMARPFTAGGAGGGTANSGPAIKPVAYSPKLNTPSSQGRASVKQPQNGLQPSPSPAK
AQAADKPDGTKTAAAPARSSGPSSRPPWVTDPNFADRFRPDKTSTVMTQHQQPAQPTPMQ
NRSSIMQAAQQAPEESGRTPLCGACNKIIRGRYLVALGRSWHPEEFTCSQCKVVLEEGGF
FEERGSVYCTKCHDNRYAPNCAKCKKKITGEIMHALKMTYHVECFKCAACKTAIRNQAFY
MEEGEPYCEKDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCQINLEGKTF
YSKKDKPLCKGHAFAPV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaacacatcgaaggacaagaggcgatgaacatctactctgtaaacctcagt
ggcccggcgccttggggcttcaggctgcagggtggcaaggacttcagcatgcccctcact
gtgtctaggctgaccccgggtgggaaggcagctcaggctggtgtcggtgtgggagactgg
gtggtgtccatcagcgacaccaatgcagaggacatgacccatgtggaggcacaaaaccag
atcagagcagcaacagactccctcaccctcaccctcagcaaagcttttaaagcgggagag
cagaaggactcacttgctccggcttctgttccgccaaagtactcctttgctcccagcaca
accattaacaagatggcgaggccatttacagcaggtggtgctggtggtggtactgccaac
tcaggacccgctattaaacctgtggcgtactcccctaaacttaacaccccgagctctcag
ggccgtgccagtgtgaagcagccacagaatggccttcagccaagtccctcacctgccaag
gcccaggcagcagacaaaccagatggcactaagactgcagcggccccagcacgcagctcg
ggaccctcctctcgacccccgtgggtcactgaccctaattttgctgaccgcttccggcca
gataagaccagcaccgtgatgacccagcaccagcagccggcccagcccactcccatgcag
aaccgcagctccatcatgcaggcagcgcagcaggcgcccgaagagagcggcaggaccccg
ctctgtggggcctgcaacaaaatcataaggggtcggtacctggtggcgttgggccgttcc
tggcacccggaggagtttacgtgttcgcagtgtaaggtggtcctggaggagggcggcttc
ttcgaggagagagggtctgtctactgcaccaagtgccacgacaaccgatacgctcccaac
tgtgccaagtgcaaaaagaagatcaccggggaaatcatgcatgccctgaagatgacctac
catgttgagtgtttcaagtgtgcagcctgcaagactgccatcaggaaccaagccttttac
atggaggagggagaaccctactgtgagaaagactatgagaagatgtttggcaccaaatgc
cacggctgtgactttaagattgatgccggcgatcggtttctggaggccttgggctacagc
tggcacgatacgtgcttcgtctgtgctctctgccaaatcaacctggaggggaagacgttc
tactcaaagaaggataagcccctgtgcaaaggccatgccttcgctccagtgtga
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