Pseudochaenichthys georgianus (South Georgia icefish): 117453748
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Entry
117453748 CDS
T09629
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117453748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117453748
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117453748
04031 GTP-binding proteins [BR:
pgeo04031
]
117453748
Membrane trafficking [BR:
pgeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
117453748
Others
Specific organelles associated proteins
Auto phagosome
117453748
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117453748
GTP-binding proteins [BR:
pgeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
117453748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
SRPRB
G-alpha
PduV-EutP
AAA_16
Septin
AAA_7
RsgA_GTPase
NACHT
AAA_22
Motif
Other DBs
NCBI-GeneID:
117453748
NCBI-ProteinID:
XP_033948604
LinkDB
All DBs
Position
1:10099933..10108956
Genome browser
AA seq
239 aa
AA seq
DB search
MESSLEFSSSLGSVSSLLTRCRTFKVLVIGDSGVGKTCLTHRLCAGDFPSRVEATIGVDF
RERLLDINGERIKLQLWDTAGQERFRKSMVHHYYRNVHAVLFVYDVSRPNSFSGLTAWIE
ECRQNSLGQDIPRFLVGNKSDLRDPSWADNQVSQELPMTFAKSHGMMFFETSAKNSPNNS
GNSQRSGKEVPYQQDKVEDIVFAVAAKLRRQNKPASPPMNGSFKIPNKRTPEKNMWTCC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctctctggagttttccagctctctgggcagtgtgtcctcgctgctgacccgc
tgtcggacctttaaggtgcttgtgataggagactccggggtggggaagacctgcctcaca
cacagactctgcgccggagacttccccagcagagtggaggccaccatcggcgtggacttc
cgcgagaggctgctggatatcaacggagagagaattaagctccagctgtgggatacggca
gggcaggagcgtttccgtaagtccatggtgcaccactactaccgtaacgtgcacgctgtg
ctcttcgtgtacgacgtcagccgtcctaacagcttcagcggcctgactgcgtggatcgag
gagtgcaggcagaactccctcgggcaggatatccccaggttcctggtgggtaataagagt
gatctccgtgaccccagctgggctgacaaccaggtgagccaagagttgccgatgaccttc
gccaagtctcatggcatgatgtttttcgagacgtccgccaagaactctccaaacaatagc
ggcaacagtcaaaggagtggcaaggaagtgccgtatcagcaggataaagtggaggacatc
gtttttgctgtcgctgccaaactaaggagacagaataaacctgcaagcccccccatgaac
gggtcctttaaaatcccgaacaagagaacaccggagaaaaacatgtggacctgctgctga
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