Pseudochaenichthys georgianus (South Georgia icefish): 117453768
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Entry
117453768 CDS
T09629
Symbol
fbxo38
Name
(RefSeq) F-box only protein 38
KO
K10313
F-box protein 38
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117453768 (fbxo38)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117453768 (fbxo38)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
T7_gp14
Motif
Other DBs
NCBI-GeneID:
117453768
NCBI-ProteinID:
XP_033948628
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All DBs
Position
10:40558078..40581602
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AA seq
1172 aa
AA seq
DB search
MGPRKKASKPQPVVGSSGGEVLLRPTEPKDYINELSHEVLCHIFRYLPMKDIMCMECLSR
KLREAVTLYLRVVKVVDLCAGRWWEYMPSGFTDGSFLLLLKKMPDLEQLYGLHPRYLERR
RVRAYEAFSIPGVLEAVQACPNLLGVETSHLELVEAIWNYMPQVHILGKFRNRNGAFPIP
AENKLTIPITAKIQTLHLVGVNVPEIPCVSMLRHLYLKWVRLTKPQPFKDFLCVSLRTFV
MRNCAGPTNSLKYVPLVTGLASARNLEQLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTI
VFGACKNSLEVDLGYLIITAARRLHELRIQPSLTKDGVFSALKMAELEFPQFETLHLGYV
DEFLLQCKMTHSELVKYGLADVIENPGIITDIGVKVVNEVFTNIKYLLIYNCPHLHNPHH
WITDQSRWSRLVDLTLVRCHAIKLESFSQFIEALPSLEFICLDQMFREPPKGCARVGLSA
GTGIGVSSALVSNQNSNNDNDNNNNHHHHNNEPNMPPAPPPVNIINNNNNNNNQRQQQEH
NEVNGMEEEEEEEEVMLEEENMEHQIELKGAQGEVRAEGADAAPGPSRLAETPRRPDEEQ
AGPSGLVQQNRAAGATVPKPPPVISDSDSEEEECLVSRLMPASCLQQPASCAEGKGKTPL
RRSNNVAGSAADSPDLTKAQLSESSCEKSCQVTSEQIKADMKAAAADTSRRTSAKGAEAA
ARLGGDTGTGRGPGGRPLTGSAAWAGPGAASSRQVGGCGRVVMGTSHRATTTTERATGTG
RPSEGPEGPSGAGTEKSAACVDNGAPRCAAVNHAYRRASLLPAQGERPAPPPGSGSQRGQ
HGDKDFVPRRPLTRSCTRMTPVSLVSETDLSRARPRVAVRRKRMADKSTSTSDPVTEDDH
VQVLSLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKQLRVESAPIVNRFDFA
QCKKLDMEQVLDQILRMPPERNRIIYMRPMHQIDSVGLERQLFQGPYPYHIAIVHEFSNP
PNIRNKVRIRSWMDTIANISQELIKYEFFPEASRTEEDVKKYPKYPWGRDIYTLEGVVDE
APYSMITDFPWLRTLRAADPNSYARYDFEDDESTTIYAPRRKGQLSADICMETIGEEISE
RRQSKRGVFQRVVVLFLHHCDTPGEPVDDDYI
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggggccgaggaagaaggcctccaaaccgcagcctgtggtgggcagcagtggaggagaa
gtgctcctgagacccactgagcccaaagactacatcaatgagctgtcccatgaagtcctc
tgtcatatattcaggtaccttcccatgaaggacatcatgtgtatggagtgtctgtcccga
aagcttcgagaagctgtgactctgtacctgcgcgtggtcaaggtggtggacctgtgtgcc
ggccgctggtgggagtacatgccttcaggctttacagatggcagttttctgctccttttg
aagaagatgccagatctggagcagctatatggcctccaccctcggtacctggagaggagg
cgagtccgagcctacgaggctttcagtatacccggagtccttgaggcagtacaagcctgt
cccaatctgctgggcgtggagacgtcccacctggagctggtggaagccatatggaactac
atgcctcaggttcatatactggggaagttccgcaaccgtaacggggcctttcccattcct
gctgagaacaaactgaccatccccatcactgcaaagatccagaccctgcatctcgtgggc
gtgaatgtcccagagatcccctgcgtgtccatgctgcgccatctctacctgaagtgggtg
cgcctcaccaaacctcagccgtttaaggacttcctgtgtgtgagcctgagaacctttgtc
atgcgcaactgtgcagggccaacgaactccctcaaatacgttcccctggtaacgggctta
gcatcagctcggaacctcgagcagttggagctggtgagggttcccttcctgggggggctg
atccagcatgtggtggaagacagctggaggtcaggaggatttcggaacctccacaccatt
gtgtttggagcgtgtaagaactctctggaagtggacctgggttacctcatcatcactgct
gctcgcaggcttcacgagctgcgcatccagccttctctgaccaaagatggcgtcttctca
gccctgaaaatggctgaactagagtttcctcagtttgagacacttcatctgggatatgtg
gatgagttcctgctgcaatgtaagatgactcactcggagctggtgaagtatggcctggct
gacgtcattgagaacccaggcatcatcactgatattggagtgaaggtggtgaacgaggtg
ttcactaacatcaagtacctgctgatctacaactgtcctcacctgcataaccctcaccac
tggatcacagatcagtccaggtggagtcgtctggtcgatctcactctggttcgctgtcat
gccatcaaactggaatccttctcccagttcatagaggcacttcccagcctggagttcatc
tgcctggaccagatgtttagagaaccacccaagggctgtgccagggtgggtctgagtgca
gggactggcatcggcgtgtcctcggcacttgtcagcaaccagaactccaacaacgacaat
gacaacaacaacaaccaccaccaccacaacaatgagcccaacatgccccctgcccctcca
cctgtcaacatcatcaacaacaacaacaacaacaacaaccagagacagcagcaggagcac
aatgaggtaaatgggatggaggaggaggaagaggaggaggaggtgatgttggaggaggag
aacatggagcatcaaatcgagctgaaaggagcacagggggaggtgagagctgagggggcg
gacgctgctccagggcccagccgcctggctgaaacgccacgacgtcccgacgaggagcaa
gcaggtcccagtggcttagttcagcagaacagagcagcaggggcaactgttccaaagccc
cccccggtcatctcagactctgacagtgaggaagaggaatgtcttgtatcaaggctaatg
ccagcttcctgtttgcagcagccagcttcctgtgcagaagggaaaggaaagactcctctg
aggcggagcaacaacgtggccggatcagcggcagactcgcctgacctgacgaaggctcag
ctgtcagagagcagctgtgagaagagctgccaggtgaccagcgaacagatcaaagccgac
atgaaggctgctgctgccgacaccagcaggaggactagtgctaaaggagcggaggctgct
gctcgcctcgggggggacactgggacagggcggggccctggagggaggccgctcactggc
tctgctgcctgggctggacctggagcagcctcttccaggcaggtaggtggatgtgggagg
gtggtgatggggacctcccacagagcaaccacaaccactgagagagcaacaggaactggc
aggccaagtgagggcccagaaggcccctctggagcagggactgagaagagcgctgcttgt
gtggacaacggggctcccaggtgtgctgctgtcaaccatgcctacaggagagcatcactg
ctgcctgcacagggagagaggccagccccccccccggggtcagggtcacagcgcggtcag
cacggagacaaggactttgttcctagaagacctttgacccgatcttgcactcgtatgacc
cctgtgtcgctggtgtctgagacagatctttcaagagccaggcctcgagtcgcagtgagg
aggaaacgaatggctgacaagtccaccagcacctcggaccctgtcaccgaggacgaccac
gtacaggtgttgtctctgaagagtaagaacctggtgggcatcactctgactaactgtgga
atcactgacctggtcctcaaagactgccccaagatgatgttcatacatgccaccagatgt
cgagtgttgaagcagctgcgagtggagagcgcacccatagtgaaccgctttgatttcgcc
cagtgtaagaagctggacatggaacaggtcctggatcagatactgagaatgcctcctgag
aggaaccgcatcatctacatgcgccctatgcaccagattgactctgtgggattggagcgc
cagctcttccaggggccctatccctatcacatcgccatagtgcatgagttcagcaaccct
cccaatatacgcaataaggttcgcatccgcagctggatggacaccatagccaacatcagc
caggagttgatcaagtatgagttcttccccgaggcctcaagaacagaagaggatgtgaag
aagtatcccaaatacccctggggccgggacatctacacactggagggggtggtggacgag
gccccctacagcatgataacagacttcccctggctgaggaccctgagggcagcggacccc
aacagctacgcccgctacgactttgaggacgatgaaagcaccaccatctacgcacccagg
cgtaaaggccagctgtcagccgacatctgcatggagaccatcggggaggagatctcagag
cggagacagagcaagagaggagtctttcagagggtcgtggtcctgttcctccatcactgt
gacacaccaggagagcctgtggacgatgactacatctag
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