KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117453787
Entry
117453787         CDS       T09629                                 
Symbol
polr2g
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03020  RNA polymerase
pgeo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117453787 (polr2g)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117453787 (polr2g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgeo03021]
    117453787 (polr2g)
   03019 Messenger RNA biogenesis [BR:pgeo03019]
    117453787 (polr2g)
   03400 DNA repair and recombination proteins [BR:pgeo03400]
    117453787 (polr2g)
Transcription machinery [BR:pgeo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117453787 (polr2g)
Messenger RNA biogenesis [BR:pgeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117453787 (polr2g)
DNA repair and recombination proteins [BR:pgeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117453787 (polr2g)
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 117453787
NCBI-ProteinID: XP_033948652
LinkDB
Position
10:complement(19124864..19130082)
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTTDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccatatttctttggagcatgaaatcttactacacccgaggtactttggccct
aacctcctcaacaccgtgaagcagaagctttttacagaagtggagggaacctgcactggc
aagtatggctttgtcatcgcagttactaccatcgacaacatcggggcgggtgtaatccag
ccggggagagggtttgtcctctaccccgtcaaatacaaggccatcgtgttccgcccattc
aaaggggaggtggtggatgctgtggtcactcaggttaacaaggttggattgttcacagaa
attggtcccatgtcctgctttatctctcgccattccatcccctcagaaatggagtttgac
ccaaactccaatcctccttgttataagacaactgatgaggacattgtaatccaacaagat
gatgagatccggctgaagattgtgggaacaagggttgacaagaacgacattttcgcaatt
ggatctcttatggatgattatctgggtcttgtcagctga

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