Pseudochaenichthys georgianus (South Georgia icefish): 117453789
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Entry
117453789 CDS
T09629
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117453789 (ddx17)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117453789 (ddx17)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117453789 (ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
117453789
NCBI-ProteinID:
XP_033948695
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All DBs
Position
1:complement(14982729..14990742)
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AA seq
639 aa
AA seq
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MRGSSSYGDRDHGRDRPRFGAMSGRGGPPPMKFGNPGERLRKKKWNMDDLPKFEKNFYTE
HPEVQHLSQFEMEEFRRNKEITVRGSGCPKAIPAFHQAQFPQYVMDVLMQQHFKEPTAIQ
AQGFPVALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQ
QVQQVALEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEIIIATPGRLIDFLESGKTNLTR
CTYLVLDEADRMLDMGFEPQIRKIVEQIRPNRQTLMWSATWPKDVRQLAEDFLREYVQIN
IGALELSANHNILQIVDVCMETEKDQKLLQLMEEIMAEKENKTIIFVETKKRCDELTRRM
RRDGWPAMCIHGDKSQPERDWVLAEFRSGKAPVLLATDVASRGLDVEDIKFVINYDYPNS
SEDYVHRIGRTARSTNTGTAYTFFTQGNCRQARDLVRVLTEARQAVNPKLLQLVDSGRGG
NGGRMRYRGNSSYNSNSTYQGGFDRRTYGGGGSKDGANGFSSGGRTNHDANHSSSSYRDR
SQGQRSSYNSGGSDQFQSYSGSGGYSSRSGGPPPGGQSSQLQGQFAQPPSAPPSAGGPIP
LMARPFAPLQPPLKGIMGQPPYPFAAPPAPPSGPPPPRK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagagggagttcctcctacggagacagagaccatggacgagacaggccacggtttggg
gccatgagcggtcgcggtggacctccaccaatgaaatttggaaatccaggagagcgtctc
cgcaagaagaagtggaacatggatgatctgccaaaatttgagaaaaacttctatactgaa
caccctgaggtccaacacctcagtcagtttgaaatggaagagtttcgcaggaacaaggag
attaccgtcagaggctctggatgcccaaaggcgatacccgcttttcaccaggcgcagttt
cctcagtatgtgatggatgtgctgatgcagcagcacttcaaagagcccacagcgatccag
gctcagggcttccctgtggccctcagtggcagggatatggtgggcatcgctcagactggc
tccggaaagactctggcttatcttcttcctgctattgtccacatcaaccaccagccgtac
ctggagagaggagatggcccaatttgtcttgtccttgctccaaccagagagctggctcag
caggttcagcaggtcgcacttgaatacggcaagtcgtcccgtatcaaaagcacctgtgtc
tatggtggagcacccaaaggaccacagattcgagacctcgagaggggtgttgagatcatt
atcgccacaccaggtcgcctcattgacttcttggagagcgggaaaactaacctgacgcgc
tgcacctacctcgtgctggatgaagcagaccgcatgctggacatgggcttcgagccacag
attcgcaagatagttgaacaaatcaggcctaacagacagactctgatgtggagtgcaacc
tggccgaaggacgtccggcagcttgccgaggacttcctgagggaatatgtccaaataaat
attggcgcactggagctcagtgccaaccacaacatcctgcagattgtcgatgtctgcatg
gagactgaaaaggaccagaaacttcttcagctgatggaggagataatggctgaaaaagaa
aacaaaaccatcatctttgtggagacaaagaagcgctgtgatgaactcaccaggaggatg
aggcgggatgggtggccagcaatgtgtatccatggagacaagagccagccagaaagagac
tgggtacttgcagaatttcgcagcggtaaagctcctgtactgcttgctaccgacgtggcg
tctcgtggtctggatgtggaagatatcaagttcgtcatcaactatgactaccccaactcc
tcggaggattacgtccaccgtattggacgtacggcccgcagcaccaacacgggtacagct
tacaccttcttcacccaggggaactgtcgacaggcccgggacctggtccgggttctgact
gaggcccggcaggccgtcaaccccaaactgctccagctggtggattcagggcgtggtgga
aacggcggcagaatgcgttaccgtggcaacagctcctacaactccaacagcacgtaccag
gggggtttcgatcgccggacatatggcggtggtggcagcaaagatggcgccaatggcttc
agcagtggcggtcgcaccaaccatgatgcaaaccactcctcttcctcctacagggacaga
agccaggggcaaaggagtagctacaactctggtggctccgatcagttccagagctacagc
ggcagcgggggctacagctcccgcagcggaggcccgccccctggaggtcagagcagccag
ctgcagggtcagtttgcccagcctccttctgctcctccatcagcgggggggccaattcct
ctgatggctcggcccttcgctcctctacagccaccgctcaagggcatcatggggcagcct
ccttacccttttgctgctccacccgctcctccttcaggccctcctcctccccggaagtag
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