Pseudochaenichthys georgianus (South Georgia icefish): 117453800
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Entry
117453800 CDS
T09629
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117453800 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgeo01007
]
117453800 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117453800 (hars)
Enzymes [BR:
pgeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
117453800 (hars)
Amino acid related enzymes [BR:
pgeo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117453800 (hars)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117453800 (hars)
Prokaryotic type
117453800 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
XH
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
117453800
NCBI-ProteinID:
XP_033948675
LinkDB
All DBs
Position
10:41055697..41071526
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AA seq
512 aa
AA seq
DB search
MADKAQIQEAIKVQGEVVRKLKSEKASKEQIDEEVSKLLQLKAQIGGDDGKHQFVLKTAK
GTRDYNPKQMAIREKVFNTILGCFKRHGAETIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QYDAMIPDAECLKIVYEILSELDIGDFRIKVNDRRILDGMFAVCGVPGDKFRTICSTVDK
LDKMSWEEVRKEMVSEKGLSEEAADQIGEYVSLQGGMELAERLLQDQKMSQSKQACAGLT
DIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGIIYEGVLTQAGIAAEAQNASGAEESVS
VGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASAQRVRTTEVQVMV
VSAQKNLLEERLKLLTELWNAGIKAEVIYKKNPKLLSQLQYCEDSGIPLVAILGEQELKD
GVVKLRAVATREEADISRADLIAEIKRRTSEA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaggcacagatacaagaagcgattaaagtccaaggtgaagtggtgcggaag
ctgaagtcagagaaggctagcaaagagcagatcgatgaagaggtttccaaactgctgcag
ctgaaggctcagatcggaggagatgatggaaaacaccagtttgttctcaagacggcaaag
ggaacgagggactacaaccccaagcagatggccatcagagaaaaagtgttcaacaccatc
ctcggctgcttcaaacggcacggtgcagagaccatcgacacacctgtttttgaactaaag
gaaacgttgacaggaaagtatggagaagactcgaagctcatctacgacctgaaggaccaa
ggaggcgagctgctgtccctcagatatgacctcactgtgcccttcgctcgctacctggcc
atgaacaagataacaaacatcaagcgttaccacatcgctaaagtgtatcgccgtgacaac
cccgccatgactcggggacgttaccgagagttctaccagtgtgattttgacatcgcaggg
cagtatgacgccatgattccagacgctgagtgtttgaagatcgtctacgagatcctcagt
gagctggacatcggagacttccggatcaaggtgaacgacagacgcatcctggacgggatg
ttcgctgtgtgcggtgttccaggcgacaagttccgcaccatctgttcaacagtggataaa
ctggacaagatgtcgtgggaggaagtgaggaaggagatggtgagtgagaagggtctctca
gaggaggctgcggaccagatcggggagtacgtcagtttacagggtggcatggagctggca
gagcgcctcctgcaggatcagaagatgtctcagagtaagcaggcctgtgcggggctgacg
gacattaagctgctgttcagctacctgcagctgttccaggtcacggacaaggtggtgttt
gacctgagtctggcccggggtctggactattatacagggatcatttacgagggggttctg
actcaggcgggcatcgctgctgaagcccagaatgcttctggtgcagaggagagtgtgagc
gtgggcagcgtagcgggcgggggccggtacgacggactggtggggatgtttgaccccaag
ggcaggaaggtgccatgtgtgggggtcagcatcggcatcgagaggatcttctccatcatg
gagcagaaggccgaggcctcagcacagagggtccgcaccacagaggttcaggtgatggtg
gtgtctgctcagaagaacctgctggaggagagactcaaactgctcactgagctctggaac
gctggcatcaaggcagaggtaatctacaagaagaaccccaaactgctgagtcagctgcag
tactgcgaggactcggggatccccctggtggccatcctgggagagcaggagctgaaggat
ggggtggtgaagctgcgcgccgtggcaaccagagaggaggctgatatatccagagcagat
ctgatagctgagatcaagaggaggacctctgaggcctag
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