KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117453824
Entry
117453824         CDS       T09629                                 
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03018  RNA degradation
pgeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117453824 (lsm6)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117453824 (lsm6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgeo03019]
    117453824 (lsm6)
   03041 Spliceosome [BR:pgeo03041]
    117453824 (lsm6)
Messenger RNA biogenesis [BR:pgeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117453824 (lsm6)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     117453824 (lsm6)
Spliceosome [BR:pgeo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    117453824 (lsm6)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 117453824
NCBI-ProteinID: XP_033948721
LinkDB
Position
1:complement(37793274..37795407)
AA seq 80 aa
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAIEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKV
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagtttgagaaagcagaccccgagtgactttctgaagcagatcattgggagacctgtg
gtggtcaaactgaactctggagtggattacagaggtgtcctggcctgcctggatggttac
atgaacattgccatcgagcagactgaggagtatgtcaacgggcagctcaagaacaagtat
ggagatgcttttctaagaggaaacaatgtcctttacatcagcacccagaagaggaaagtg
tag

DBGET integrated database retrieval system