Pseudochaenichthys georgianus (South Georgia icefish): 117453830
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Entry
117453830 CDS
T09629
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00061
Fatty acid biosynthesis
pgeo00071
Fatty acid degradation
pgeo01100
Metabolic pathways
pgeo01212
Fatty acid metabolism
pgeo03320
PPAR signaling pathway
pgeo04146
Peroxisome
pgeo04216
Ferroptosis
pgeo04920
Adipocytokine signaling pathway
Module
pgeo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117453830
00071 Fatty acid degradation
117453830
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117453830
09143 Cell growth and death
04216 Ferroptosis
117453830
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117453830
03320 PPAR signaling pathway
117453830
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pgeo01004
]
117453830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117453830
Enzymes [BR:
pgeo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117453830
Lipid biosynthesis proteins [BR:
pgeo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117453830
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of breast milk
117453830
Exosomal proteins of breast cancer cells
117453830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117453830
NCBI-ProteinID:
XP_033948725
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All DBs
Position
10:35447319..35494690
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AA seq
698 aa
AA seq
DB search
MLGQEFLRKLKMPDLDDVSQYIQSVSTPVLVSVGAVAAATTYYLATRPKALPPVCDLRMQ
SVEVQGGELARRSVLLKGDANITHFYDDATTMYECFLRGVRVSNNGPFLGSRKPKQPYEW
MSYREVMERSENLGSAFLHKGHSKTTDPHIGIFSQNRPEWTISELACYTYSLVSVPLYDT
LGTEAILYIIDKASISTVLCDVAEKVELVLDCVKDRTHSVKTIVLMGAPSADLVSRGQQA
GVHIISLQEMEAIGKANHRQPMPPRPEDMALICFTSGTTGNPKGAMLTHKNVVSNCSAFI
KTTEVCAPFSHSDVHISFLPLAHMFERVVQGVMIVHGARIGFFQGDIRLLSDDLNTLKPT
VFPVVPRLLNRMYDKIFGQANTSLKRWLLGFAYRRKESEIKRGIVRRDSIWDRLIFGKVQ
ASLGGRVRLMLTGAAPISPTVLTFLRAAIGCQLYEGYGQTECTAGCTLTMPGEYNAGHVG
APLPCNSLKLVDVSEMNYLAVNGEGEVCVKGPNVFQGYLKDPEKTAEAIDADGWLHTGDV
GKWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENVYMRSDAVAQVFVHGDSLQACLVAVV
VPDPDFLSGWTKRTLGLEGSFQELCGRAEVKAAIFEDMMRLGKEGGLKSFEQVKSIYVHT
ELFSIENGLLTPTLKAKRNEQRQYFRSQIDNLYSGIKM
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgctgggacaggagttcctgcggaagctgaagatgccagatctggatgatgtcagccag
tacatccagagcgtctccaccccagtgctggtcagcgtgggggcggtggctgccgcgaca
acatattacctggcaacccggcccaaagccctcccgccagtgtgcgacctccgcatgcag
tccgtggaggttcagggtggagagttggcacgccgatcggtgctgctgaaaggagacgct
aacatcacacacttctacgatgacgccacaacaatgtacgagtgcttcctcagaggtgtc
agagtctccaataacggcccattcctgggctccaggaaacccaaacagccgtatgagtgg
atgtcctacagagaggtaatggagcgatcagagaatttgggatccgcgtttcttcacaaa
ggacactccaagacgacagacccccacattggcatcttctctcagaacagacccgagtgg
accatcagtgagctggcgtgttacacctattctctggtgtcagtccctctgtatgacaca
ctgggcacagaagccatcctctacatcatagacaaagcttccatctcgaccgttttgtgt
gacgtggcagagaaagtggagctggtgctggactgtgttaaggacaggacccactcagtg
aagaccatcgtcctgatgggggcccccagtgctgatctggtcagcaggggccagcaggcg
ggggtccacatcatcagcctgcaggagatggaggctattggaaaggctaaccatcgccaa
ccaatgcctccacgacctgaggacatggctctcatctgcttcaccagtggaacaacagga
aacccaaagggagcgatgttgactcacaagaatgtcgtgtccaactgctcggccttcatc
aaaactacagaggtgtgtgctccgttttctcacagtgatgtccatatttccttcctgccc
ctggctcatatgttcgagagagtagtccagggagtgatgatagtgcacggagccaggatc
ggctttttccagggagatatacgtctgctgtcagatgacctgaacacactgaagcccact
gtgttccctgtggtgccccgactcctcaacagaatgtatgataaaatcttcgggcaggct
aatacctccctgaagcgctggctgctggggttcgcctacaggaggaaggagtctgagatc
aagagaggcatcgtgaggagagacagcatctgggatcgactcatcttcgggaaggttcag
gccagcctcggaggccgtgtgcgtctcatgctgacaggagctgctcccatctcccccacg
gtcctcaccttcctcagagctgctataggctgccagctctatgaaggctatggacagaca
gagtgtactgctggatgcaccttgaccatgcccggggagtacaatgcaggtcacgttgga
gctcctctgccctgtaactccctcaaactggtggatgtgtctgagatgaactacttggct
gtaaacggggagggagaggtgtgtgtgaagggccctaacgtgttccagggctacctgaag
gacccagagaagacggcagaggctatcgatgcagatggatggctgcacaccggagacgtt
ggaaaatggcttcctaatggcacgctgaagatcgtggacaggaagaagcacatctttaag
ctggcccagggggagtacatcgctcctgagaagatagagaatgtgtacatgaggagcgat
gcagtggcacaggtgttcgtgcacggagacagtctgcaggcgtgtttggtagctgtggtg
gttcctgaccctgacttcctgtctggctggaccaagagaactctgggactggagggcagc
ttccaggagctctgtggcagagcggaagtaaaggcagccatctttgaggacatgatgaga
cttgggaaggaaggaggcctcaagtcctttgagcaggtgaagtccatctacgtccacact
gagctgttctccatcgagaacggcctgctcactcccacactgaaggcgaagaggaacgag
cagcgacagtacttcagatcccagatagacaatttgtactccgggatcaaaatgtaa
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