Pseudochaenichthys georgianus (South Georgia icefish): 117453866
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Entry
117453866 CDS
T09629
Name
(RefSeq) polycomb group RING finger protein 3
KO
K11488
polycomb group RING finger protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117453866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117453866
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
117453866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_4
zf-RING_4
DUF3337
GAGA
TRAF3_RING
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
117453866
NCBI-ProteinID:
XP_033948780
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Position
10:complement(5721176..5832985)
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AA seq
249 aa
AA seq
DB search
MAVLGNPDMLTRKIKLCHINAHITCRLCDGYLIDATTVTECLHTFCRSCLVKYLEENNTC
PTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEIKKQRDFYQKLGMEVPGDIKGDH
CHMKTHLDQRNGDTKTEDAVHKEPGEEKPEEENDYHRSDEQVSICLECNSSKLRGLKRKW
IRCSAQATVLHLKKFIAKKLNLTSFNELDILCNEEILGKDHTLKFVVVTRWRFKKSPLLL
HYRPKMDLL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgttagggaaccccgacatgctgacgaggaagataaagctgtgtcacatcaac
gcccacatcacatgccgtctgtgtgatggatacctgatcgacgccaccaccgtcaccgag
tgcttacacaccttctgcagaagctgcctagtgaagtatctggaggaaaacaacacgtgc
cccacgtgtaggattgttattcatcagagccatccactgcagtacatcggccatgacaga
acaatgcaagacattgtctacaaattggtaccgggacttcaagaggcggagataaagaag
cagcgggacttttatcagaagctggggatggaggtgccgggagacattaaaggagatcat
tgccacatgaagacgcatctagatcaacgcaacggcgacacaaaaacagaggacgcggtc
cataaggagccgggagaggagaaaccagaggaggagaacgactatcaccggagcgacgag
caggtcagcatctgcttggagtgcaacagcagcaagctgcgaggtctgaagaggaagtgg
atccgctgctcggcacaggcgaccgtcctgcacctcaagaagttcatcgccaaaaagctc
aacctgacatcgtttaatgagctggacattttatgcaacgaggaaattttgggaaaggac
cacactttgaaatttgttgttgtgacaagatggagatttaagaaatcccccctcctgctc
cactacagacccaagatggatctgctgtag
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