Pseudochaenichthys georgianus (South Georgia icefish): 117453873
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Entry
117453873 CDS
T09629
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03420
Nucleotide excision repair
pgeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117453873 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
117453873 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117453873 (cul4b)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117453873 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117453873 (cul4b)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
117453873 (cul4b)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117453873 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
117453873 (cul4b)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117453873 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
PG_binding_4
Motif
Other DBs
NCBI-GeneID:
117453873
NCBI-ProteinID:
XP_033948791
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Position
10:complement(14914789..14927694)
Genome browser
AA seq
862 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARPVATDVKPDSGNITSPKKRKINGSEREDTADKSLNSSSSS
SSSSCSPLHIQKKLRFEDSVDIIGLDVKMAEEAAAAAVVAASCSNNKSKAVFLPGVGTGH
HANGLTKPAGSSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAIQNST
SIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKSQIEQFREDALDSVLFLKKIDK
CWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQCKTIDGIL
LLIEMERNGEAIDRTLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVP
DYLHHVSKRLEEEADRVITYLDQSTQKPLIASVEKQLLGEHLTTTLQKGLTHLLDENRIQ
DLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHVID
ICFIKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIM
IIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKD
MELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTF
YLGKHSGRKLQWQSTLGHCVLKAEYKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLAT
GIEDSELRRTLQSLACGKARVITKIPKSKDVEDGDKFSCNDDFRHKLFRIKINQIQMKET
VEEQASTTERVYQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKRIE
SLIDRDYMERDKENPNQYNYVA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
ccagtggctactgatgtcaaacccgacagcggtaatatcacatccccgaagaagaggaaa
ataaacggctctgagagggaagacactgctgacaagtccctgaattcctcctcttcttcc
tcctcctcctcctgctccccgctgcacatccagaagaagttgaggtttgaggattcagtg
gatatcattggactggatgtgaaaatggctgaggaggctgctgccgcggccgtcgttgct
gcttcttgctccaataacaaaagcaaagccgtgttcctgcccggtgtcgggacgggacac
catgcgaacggactgacgaagcccgcaggctcctccgggaccttctccaacagtaaaccc
ggggcggccaagaaactagtcatcaagaacttcaaagaaaaacccaaattgcctgagaac
tacacacaggagacctggcagaagctgaaggaggcggtggaggccatacagaacagcact
tcaatcaagtacaacctagaagagctctatcaggcagttgagaacctgtgctcccataag
atatctgccaagctttacaaacagctgagggccgtgtgtgaagaccacatcaagtcacaa
attgagcaattcagagaggatgccttggacagtgtgcttttcctaaagaaaattgacaaa
tgctggcaagatcactgcagacaaatgatcatgattaggagtatatttttgtttttggac
cgtacctatgttttacaaaactcaatgctgccatctatctgggatatgggtctggagctg
ttcaggttctacatcatcagcgatctgaaggtccagtgtaaaaccatcgacgggatactg
ctgctcatagagatggagcgaaacggagaagcgatagaccgcactttactgaggagcctg
ctgagcatgctctctgacctgcagatttatcaagactcctttgagcaacgctttttggag
gaaactaatcgcctgtacgctgcagagggacagaggctgatgcaggagagagaggtccca
gactatctccatcatgtcagcaagcgcctggaggaggaggctgacagagtcatcacgtat
ttagatcagagcacacaaaaaccgctcattgctagtgtggagaagcagttgctgggtgaa
catctcacgactactctgcaaaaaggtctgactcacctgctggatgagaacagaattcag
gatctgtctcttctctatcaactcttcagtcgagtgcgaggtggcgtgcaggtcctcctg
cagcactggatagaatacataaaggcttttggaagcacaatcgtaatcaatccagaaaaa
gacaaaacaatggtgcaagagttgctggactttaaggacaaggtggatcacgtcattgac
atctgcttcataaagaacgagaagtttgtcaacgccatgaaggaggctttcgagacattc
atcaacaaacggccaaataaacctgcagagctcatagcaaaacacgtggattcaaagtta
agggcaggaaacaaagaagcaacagacgaagaactggagaagatgctggataaaataatg
attatttttagattcatctatggaaaggatgtttttgaagccttttacaaaaaggatctt
gccaaaaggttgctggttggaaaaagcgcctctgtggatgctgaaaaatctatgttgtcg
aagctgaaacatgaatgtggagcagcgttcaccagcaaactggagggcatgttcaaggat
atggagctttctaaagacatcatggtgcagttcaaacagtacatgcagtgccaaaacatt
ccaggcaacattgagctgacggtgaacatcctcacgatgggttactggccaacctatgtc
cccatggaagtgcacctgcctgctgagatggtgcgactacaggagatcttcaagactttc
tacctgggcaaacacagcggcagaaagctgcagtggcagtctacactcggccattgtgtc
ttaaaagctgaatataaagagggcaagaaggagctgcaggtgtccctcttccaaacgctt
gtgctgctgatgttcaacgaaggagaggagttcacactggaggagatcaaactggcaacc
ggaatagaggacagtgaactgcgccggactctgcagtcacttgcttgtgggaaggcacgt
gtcatcaccaaaatcccaaaaagcaaagatgtggaggatggggacaagttttcttgcaat
gatgacttcagacacaagctcttcaggatcaaaataaaccagatccagatgaaagaaacg
gtggaggagcaagccagtaccacagaaagggtctatcaggatcgtcagtatcagattgat
gctgccatcgtgcggatcatgaagatgaggaagactctgagccataatctcttgatgtct
gaagtgtacaaccagctcaagttccctgtcaagcctgctgacttgaagaagaggatagag
tctcttattgacagggactatatggagcgtgacaaggagaaccccaaccagtacaactat
gtggcttag
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