Pseudochaenichthys georgianus (South Georgia icefish): 117453879
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Entry
117453879 CDS
T09629
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117453879 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Other domain-containing proteins
FERM domain-containing proteins
117453879 (frmpd1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ
FERM_C_FAK1
PDZ_6
FERM_f0
DUF6288
Motif
Other DBs
NCBI-GeneID:
117453879
NCBI-ProteinID:
XP_033948799
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All DBs
Position
10:complement(22429477..22458963)
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AA seq
1725 aa
AA seq
DB search
MEEKERCRSRSPARRASRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSLSNQNYVAKL
TLQITRDPVLDSSTGHGFILTTNAPLLVRDVAPGSPADGILYPGDQVLQINEMVLEDLSG
EQVENTIRDLEDCINVTVLRHMTNPKSSIMSAEKRARLRSNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDNSTTVKDIVLTLKDKLSLRAIEYFALILEQQYSITK
LLLLHEDELIQKVVQKKDSHDYRCLFRVSFIPKDPMELLQDDPSTFEYLFLQSVGDVLRE
RFAVEMKCNTALRLAALHMHERLDSCGQTRASIKSITREFGMESFISPTLLSNMREKDLR
KAISYHLKKIQALLEPRQKVISASQARLAYLTQLGELISYGGRSYTATMMLQDREVLVSL
LVGAKYGMSQVINHKLNMISTLVEFSSISRVELLSESDKVSLLRISLHDMKPFALLMDSM
AAKDLGCLLGGYCKLLVDPSVNVFRLGRPKVRVHRIPAEEGVCGRFAEIQGVCYESLTSY
VSRCCSDSDDSTDEDDPMDSQNCKRPDPASQDWEERRREEEEKRREEERKEREDHKGKQE
VKIIVTTESMENEGEEEEGATGSGLRTFSIMDEEINMETNWYHTDPRVTSSFSSLSSGSI
SAALEESSASAKAPALLDAQRGTRTSEDLPSLDVHHPYLLEPKRHQGPLRPTNLNYRGND
NSCLCFAELSKADFLPSPPEATSDDNDDDDDDEEEEEELGLGGLRRISKIPSSRDLRMID
SIPFDRSPIKRNKKTPPKVPIRTSSIPLDKEREAEHRLSKDEEGLFLTPSPNPKPALLGK
EAVSESEDEFFDAQERFTPPVPDISDAELADRQNANRLSGGWNGPLAVPGKEPPSPIGNK
GTSSKIKREVETPKGPADALAKQQPSAPKPSQKPEAKVKPLLAPKPQLPPKPQTIPPKSP
QHGSSYAHCNGDSSGRLSSELLEMEPDTMEFKSVTSGAGGLPLTSALITAVRCSRQPLPI
TALKTEENTKRQENGPKKNKDLTQENGANVVSNDKAFMSDEKETKVEGKINGTAVPMKKP
PNLLLIPRSNSGTKPSIPPPVPPKPTTPTNLHPLSLPASSPVSPTDPSKGIFKDSVSPQN
GIHPWSSRNGSVQSGSKRVSLSHESLSPKNTDTPPPLTTSLTSTNSTGVGGLESREPGRS
GSGSDLRTSSSSLGGRLPASALRGKIQALPWYMTRSQEILGTLDYPSTSSINGDTSGFGS
GLSVASGLSDLNRTPVKAKEAVSSKLEARRNILEDGAEVVIATIKEAQDVTSHMKKANGT
NGSHPNLTLKGNSLHSGSVSSEQPQSRSHSAVGLGGVSSMQIGGDSPTSSQADTTPSQQH
REACGCRTVYANCFSGETEDSISFDEELTVYEFSRRTRPKPARPPAVSPPTPPSPKPNIL
SLLRDNPRPLSTFSTASSEISPLVSRPVSPTNSFSGPLHTLTNKNYGGLKGGFASLHQDI
DQLLLVLERGALEQPEQTVLDSKQDITVLNVGPDLNHNGTEGRTTPVPDPNCTGSSTAAM
TEAERNLLQAEARRLASGCQRATRVGWAPDEALHSLSNSFSALVQLSAACLRTNPCPGCE
LCHNASLGHRDEDDDSQEAMDKLKEIVGLYREFVGAVETAGTGSGVGGKSGGHNGSGQGQ
GESDGVRLLAKRCTVLISSVFALTQLFRTRTPDTADTPRHAPLNF
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaagagcgatgtaggagcaggtctccagctcggagggccagtcgggtgcag
caggtggtgggaacaataatacgacgtacccgggagtcgctcagcagggagcggttgctc
ggcgatgggaggtcacagcgctccaacagtctgtccaatcagaactacgtggccaaactg
acgctacagatcaccagggaccccgtcctggacagcagcaccggccatggcttcatcctc
accacaaacgcacccctgctggtcagggacgtcgccccagggagtcctgcagatgggata
ctgtacccaggggaccaggtgctgcagattaatgaaatggtgctcgaagatttgagtgga
gagcaggtggaaaacaccataagagacttggaggactgtatcaatgtgaccgtcctgcgg
cacatgacaaatcccaagtcatccatcatgtcggcagagaagagagctcgtctgaggagt
aatccagtcaaagtgcgctttgcagaagaggtggtggtcaacgggcacactcaggggaac
tctcttctcttcctgcccaatgtcctaaaagtctatttagagaacgggcagaccaaggcc
ttcaagtttgacaacagcactactgttaaggacattgtgctgactctgaaggataaactg
tccctccgggccatcgagtattttgccctgatactagagcaacagtacagcatcaccaaa
ctactgctgctgcacgaagacgagctcatacagaaggtggtgcagaaaaaagactcccat
gactacagatgtctgttcagggtgagttttatccccaaggaccccatggagctgctgcag
gatgacccctctacttttgagtacctctttttacagagtgtcggtgacgtgctgcgggag
cgttttgcagtcgagatgaaatgcaacactgcactccggcttgctgccctgcacatgcac
gagaggctggacagctgtggacagaccagggcctccatcaagagcattacgagggagttt
ggcatggaaagcttcatctctcccacactgctgagcaacatgagggagaaggacctgagg
aaagccatcagctatcacctcaaaaagatccaggccctgctcgagccgcgtcagaaggtc
atttctgcgagtcaggctcggttggcctacctcactcagctgggagagctcatttcatat
gggggacggtcctacacagctacgatgatgcttcaggacagggaggtgttggtcagcctg
ctggtgggagccaagtatgggatgagtcaggtaatcaaccacaagctcaacatgatctct
acgctggtggagttcagcagcatcagccgagtggagctgctgtcggagtcggacaaagtc
agcctactgcgcatctcactgcacgacatgaagccatttgccttattgatggactctatg
gcagccaaagacttagggtgtctgctaggaggctactgcaaactccttgtggatcccagt
gtcaatgtcttccgtctggggcgcccaaaagtgagggtgcaccgaattcctgctgaagaa
ggtgtgtgtgggaggttcgccgaaatacagggcgtgtgctatgagtccctaacaagttat
gtgtctcggtgctgcagtgactcagatgactcgacagatgaggatgacccaatggattct
cagaattgcaaacggccagacccagcaagtcaggactgggaagagaggaggcgagaggag
gaagagaagaggagagaggaagaaagaaaagagagagaggaccacaaaggcaaacaggaa
gtgaagataatagtgactacagaaagtatggaaaatgagggtgaagaggaagaaggagca
acaggaagcggtctgcgtacatttagtattatggatgaagaaattaacatggagaccaac
tggtaccacacggacccccgggtcaccagcagcttctccagcttgtccagtggctccatc
agtgctgcgctggaggagagcagcgcctcagccaaagccccggctctcctggatgcacaa
cggggaacacgcacaagcgaagatctacccagcttggacgtccaccatccctacctcctg
gagccaaaacgccatcaagggcccttgcgacccaccaacctcaattaccgtggtaatgac
aactcctgcctttgcttcgctgagctctccaaggcagatttcctccccagcccacctgag
gcgactagtgatgataatgatgatgacgatgatgatgaggaggaggaggaagagctagga
ttgggaggattaagacgcatttctaagatccctagttcaagagatttaagaatgattgac
agcataccctttgacagatcacccattaaaagaaacaaaaagacccctcccaaagtccca
ataaggacgagttcgattcctttggacaaagaaagagaggctgaacaccgcctctccaaa
gacgaagagggtctattcctgacgccttcacccaatcccaaaccagctcttttgggcaaa
gaggctgtctcagagtctgaagatgagttttttgatgcacaggagagatttactcctcca
gttcctgatatatcagacgctgagctggctgaccggcaaaatgctaatcggttgagtgga
ggctggaatggtcctctagctgtcccggggaaagagccaccctcccccattggaaataaa
ggaacatcctctaaaatcaaacgagaagtggagacacctaaaggccctgcagatgcactt
gctaaacaacagcccagtgccccaaagccatctcaaaaacctgaagctaaggtcaaacca
ctattggcacctaagccccagctgcctcccaaacctcagaccattcctcccaaatccccc
cagcatgggagttcatatgcccactgcaatggggattcctctggacgtttgtcatctgaa
cttttggaaatggagccagacaccatggagttcaagtctgttacatccggtgcaggtgga
ctgcctctcacatcagccctgattacagcagtgcgttgcagcaggcaaccactacccatt
acagcactgaaaactgaggaaaacactaagaggcaagaaaacggcccaaaaaagaataag
gatctcacgcaggagaatggagcgaatgttgtttccaatgacaaagcattcatgtctgat
gaaaaagaaactaaagttgaagggaagatcaatgggactgctgtacccatgaaaaagcca
ccaaaccttctcctgatccctcgctctaattcaggtacaaagccatccattccccctcca
gtgccccccaaacccactactcccaccaatcttcaccccttatcattaccggctagctct
cctgtctccccaactgatccatccaaagggatctttaaggacagcgttagtccgcaaaat
gggatccacccttggagcagccgcaatggcagcgtccagtcgggatccaagagggtatct
ctgagtcatgaaagcttgtcaccgaaaaacacagatacacctcccccccttaccacctcg
ctcacttccaccaactccacaggtgttgggggccttgaaagcagagagcctggcagatct
ggatcaggatcagacctgaggaccagctcctctagcctgggaggcagactgccagcttct
gccctgagggggaagatccaggctctaccttggtacatgacccgttcccaggagattttg
ggaactcttgactatccctctaccagctccatcaatggagatacatctggatttggttct
ggcttgtctgtagccagcggtttatcagacttaaacaggaccccagtcaaggcaaaagaa
gcagtgagctcaaagctagaagcacgaaggaacattttggaggacggagctgaggttgtc
atagccaccatcaaagaggcccaggatgtgacctcacatatgaaaaaggccaacgggaca
aacggctcccaccctaacctgaccctcaaagggaatagtttgcacagtggcagtgtatca
tcggagcagcctcagtcacggtcccactcagcagtcgggttaggaggtgtgtccagcatg
caaattggaggggactcgccaacatcctcacaagctgacaccaccccctcacagcagcac
cgcgaggcttgtggctgccgaaccgtttacgccaactgtttcagtggagaaactgaggat
agtataagctttgacgaggagctaaccgtttacgagttctcccgccgcacacgccctaaa
cctgcccgacccccagcggtctctcctccaacaccaccctcaccaaagcccaatattctg
tcgctgctgagggacaacccacgcccgctctctactttctccactgcctcctctgaaatc
agtcccctagtttcacgaccggtttcccccacaaactcatttagtggacctcttcataca
cttaccaacaaaaactatggtgggctcaagggaggttttgcctccttacatcaagatata
gaccaactccttctggtcttagagaggggagcactggaacaacccgaacaaactgttcta
gactcaaagcaggatataacagtcctaaatgtagggccggaccttaatcacaatggtact
gaaggcagaactaccccagtaccggacccaaattgtactgggtcaagcacagccgccatg
acagaggccgagaggaatctactccaggcggaggctcggcgattggcctctggctgtcag
cgggccacacgtgttggctgggctcctgatgaagccctacattccttatctaacagtttc
agcgccctagttcagttgtcagcagcctgcctgcgaacaaacccttgccctggttgtgag
ctctgccataatgccagcctgggccacagggatgaggatgatgacagccaggaggccatg
gacaagctgaaagagatagtgggtctatatagagagtttgttggggctgttgagacagct
ggaactgggtctggggttgggggtaagagtgggggccacaatggatctggacagggtcag
ggggagagtgacggggtgaggctactagccaaacgctgcactgttctcatctcgtccgtt
tttgcactcacgcagctcttccggacacgcacaccagacacagcggacacgcctagacac
gcacctctcaatttttga
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integrated database retrieval system
