Pseudochaenichthys georgianus (South Georgia icefish): 117453883
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Entry
117453883 CDS
T09629
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117453883 (lsm11)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117453883 (lsm11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
nec1
Motif
Other DBs
NCBI-GeneID:
117453883
NCBI-ProteinID:
XP_033948805
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All DBs
Position
10:28013550..28018628
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AA seq
337 aa
AA seq
DB search
MEERERKMVKSHSKESVTATCSSTPSAPERCGKAACSGADKTDVCSDNFDPLLALYSPTV
SLPFPNIKSFNNVAAYESFLKGGRGRAKPENVEKKRQKAMKGVADPERIERLKKLMVNNP
VTPEGESSAPRRRRHKPVKNVLTRMPLCKGSPLGELYRCVEEKIRVRVHIRTFKGLRGVC
SGFVVAFDKFWNMAMVDVDETYREPLLGEAFYHEKALTISRLFEKLRLQESPGDDEPAKK
HGAQDTASKHQPANPKSAPKPPSAAQPSSRRQDSRTESKLSTAVRIRTDKHKVSPKAQGP
EVCQKKVSQKYGKVHTRHINQLFIRGESVLLVNPQPL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagggaaagaaaaatggtaaagtcacacagcaaagaatcggtcactgcaacc
tgttcgagtacaccatcagctccggagcgttgcggtaaagctgcgtgcagtggcgcagat
aaaacagatgtctgctcggataacttcgatcctctcttggccttgtactctcccactgtg
tctcttccttttccaaatataaaaagctttaacaatgtggcggcttacgagagctttcta
aagggcggccggggtagagccaagccggagaatgtggagaagaagcggcagaaggccatg
aaaggggtggcggacccggagcgcatcgagaggctgaagaagctcatggtgaacaacccg
gtgactccggagggggagagcagcgcaccgcggagaaggaggcacaagccggtgaaaaat
gtcctcacaaggatgcccttgtgtaaaggcagtccattgggggagctgtaccgatgcgtg
gaggagaagatcagggtcagagttcacatcaggaccttcaaggggctgaggggagtctgc
tcgggctttgttgtggccttcgacaagttctggaacatggccatggtggatgtcgatgag
acgtaccgagagcctctgcttggagaggcattttaccatgagaaggccctcaccatttcc
cggctctttgagaagctgaggctccaggagagtccaggagatgatgagccagcaaagaag
cacggagcccaggacacagccagcaagcatcagcctgcaaacccaaaaagtgctccaaaa
cccccgtctgctgctcagcctagcagccggagacaggacagcaggacggagtccaaactg
tcaaccgctgttagaatcagaacggataaacacaaagtctcgccgaaggcccaggggcca
gaggtctgccagaagaaagtctcccagaagtatggcaaggtgcacacacgccacatcaac
cagctcttcatcaggggggagagcgtcctcctggtcaacccccagccgctctga
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