Pseudochaenichthys georgianus (South Georgia icefish): 117453887
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Entry
117453887 CDS
T09629
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117453887 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117453887 (rbm22)
Spliceosome [BR:
pgeo03041
]
Complex B
Other components
Prp19-related factors
117453887 (rbm22)
Complex C
117453887 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
117453887
NCBI-ProteinID:
XP_033948814
LinkDB
All DBs
Position
10:22785536..22790505
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AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEFGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKEGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPSSSPAV
MNIALPLPPGINPPPPGFGPPMFHPMSHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGARQGE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctctaggatccaacacctacaatagacagaactgggaggacgcggatttt
ccaattctgtgtcagacatgtttaggagaaaacccatatatccgcatgaccaaggagaag
tatgggaaagagtgcaagatttgtgctcgtccattcactgtgttccgatggtgcccgggg
acacggatgcgttttaagaagactgaggtctgtcagacctgcagtaaaatgaagaatgtt
tgtcaaacatgtctgctggaccttgagtttggtttgcctattcaggtcagagacaccggg
ctgtcggttaaagacgaggttcctaagtcggatgttaacaaagagtactacacacagaac
atggagagagagatagccaattctgatggaacacggccagtgggccagctgggtaaagcg
cccagctctagtgacatgttgctgaaactggccaggaccacgccatactacaagaggaac
agaccgcacatctgctccttctgggtgaaaggagagtgtaagagaggggaggaatgtccc
tacagacacgagaagcccaccgatcctgatgatcctctggccgaccagaacatcaaggac
cgttactacggcatcaatgacccggtggctgacaagctgctgaaacgggcctcaactatg
ccgcgtcttgacccaccagacgacaagtccatctccaccctctacattggaggattggga
gacactgtcactgatggagatctcaagagtcacttctaccagtttggagagatccgcacc
atcaccatagtccagaggcagcagtgtgccttcatccagtttgccactcggcagtcagct
gaaatggctgctgagaagtccttcaacaaactcatcattaatggacggaggctcactgtc
aagtggggaaggtctcaggcagcaagagggaaggagggtatcaaagaaggtgtcagtgag
atgggcaccagacttgatcctgtacctggactgcctggagctcttcctccacctccagct
ttagacgaagaagctcctgctaactacttcaacctggaccctagcagctctcctgcggtc
atgaacatcgctctgcccctccctccaggcatcaacccgcctcctccaggttttggccct
ccaatgtttcaccccatgagtcacatggctccacctatgccccccccaatgagcatgaga
cctcctggtcaaatccactacccctcccaggatcctcagcgcatgggggcccacgctgca
catggcgcacgtcaaggcgaatag
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