Pseudochaenichthys georgianus (South Georgia icefish): 117453922
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Entry
117453922 CDS
T09629
Symbol
rnf103
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117453922 (rnf103)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117453922 (rnf103)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117453922 (rnf103)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
SAP
Motif
Other DBs
NCBI-GeneID:
117453922
NCBI-ProteinID:
XP_033948850
LinkDB
All DBs
Position
10:complement(40492762..40506579)
Genome browser
AA seq
709 aa
AA seq
DB search
MWIKLFFLLLYFMVLFMLARLFEAVVWYETGMFSTHLVDPVSLSYKKLKTILESRGLPYS
GLAEKKDVSELVEKSGELTHGELYSAMKKEKEQTEAGDGSTIFSGEMHFYELVEDTKDGI
WLVQVIAKDREALLSQSNWGKMVQKVSQFGIRTGTFNCSNDYRSCIKRGWQRSTLIMSVP
QTSASKGKVMLKEYNGRRIEPEHIFRWMTSHVAHRIKTLHQSEQLVEEWRSDPAHPVKMF
LFACLPQPPAFFSALSVKFTGRIEFVFVDVHHWENHSSLSEIDVTQSPAYILKMPEGIYR
YGSSIGEFLSLAAMDTFLRGVQPEVNDLFVLSLVLINLLAWMDLFITQGATVKRFVVLIR
TLGTYNSILLGSWLPVLALLQLPYLDSLYGYSLKLLRYADTTTLASLVRADWTFYSSHPA
LFLATYLAHGLLVDYFEKKRRCGVRSQEDSTTNLEWLSNLWDWYTSYLLHPIAALQQVPS
DYSDWEVDPNFLLERLAFPDLWLRPLVNMEYIDTLPTWRFRAAGPDSGEGGGVKLDEETD
SSHSDTESVKQLDAVPIRSPNKKHESSLSSQDSGTRVCVHTNTGPSSSCECAAASPLCCR
HGNRSSPLADRTVEDGHLASEDISNYQHCDWSVWPRDVLQCLECVVCLENFASEELLMAL
PCGHVFHQHCIVVWLASGRHCCPVCRWPSYKKKLQGAAIRSSTGNPLQD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtggataaagctgttcttcttgctcctgtattttatggtgttgtttatgctagcgagg
ctctttgaggcagtggtctggtatgagactgggatgttctccacccacctggtggacccc
gtgagcctcagctacaagaagctgaagaccatcctggagagcaggggactgccttactcc
ggcctggccgagaagaaggatgtcagcgagctggtagagaaatcaggagagctgacgcat
ggagagctgtactcagccatgaagaaggagaaggagcagacggaggcaggagacggcagc
accatcttcagtggagagatgcacttctatgagttagtggaggacactaaagatgggata
tggctggtgcaggtcattgccaaggaccgggaggccctgctcagtcagtctaactggggg
aagatggtgcagaaagtgtctcagtttgggatcagaactggaaccttcaactgctctaat
gactacaggtcctgtatcaagcgtggctggcagcgctccactctcatcatgtccgttcct
cagacttcagcatcaaagggtaaagtcatgcttaaagaatacaatggccgtcgcattgaa
cctgaacacatcttccgctggatgacctcacatgtggctcatcgaatcaaaacactgcat
cagtctgagcagctggtggaggagtggcgctctgaccccgcccacccggtgaagatgttc
ctgttcgcctgcctgccccagccccccgccttcttctctgcgctgtccgtcaagtttact
ggaaggatcgagtttgttttcgtggacgtacatcactgggaaaaccacagcagcctatcg
gagatagatgtgacacagagccccgcctacattctcaagatgcctgagggcatctatcgc
tatggcagcagtatcggggagttcctgtccctggctgctatggatacgttcctgcgcggc
gtccagccggaggtcaacgatctgtttgtcctcagtctggtcctgattaacctgctggcc
tggatggacctcttcattacacagggagcaaccgtgaaacgatttgtagttctgatccga
acacttggaacatacaactctatactgctggggtcctggcttcctgttctggctctcctc
cagctgccctacctggactctctgtacggctacagtctgaagctgctccggtatgctgac
accaccaccctggccagcctggtgagagctgactggaccttctactcctcccacccagcc
ctcttcctggccacctacctggctcacggcctgctcgtcgactactttgaaaagaaacgc
cgctgtggcgtgaggagccaagaggacagcaccacaaacctggagtggctgtccaatctg
tgggactggtacacttcctatctgctccacccaatcgcagcgctgcagcaggtcccatct
gactactcggactgggaggtcgaccccaactttttattagagcgtttggctttccctgac
ctctggctgcgcccattagtaaacatggagtatattgacaccctgccaacctggaggttc
agagctgctggtccggacagcggagagggggggggtgtaaagctggatgaagagacggat
agttcacattcagacacggagagcgtgaagcagttggatgcagttcccatcagatctcca
aacaagaaacacgagagctcattgagcagtcaggacagcggtacacgtgtgtgtgtgcac
acaaacacaggccccagcagtagctgtgagtgtgctgctgcatcaccactctgctgtcgt
catgggaacagaagctcaccattagccgacaggacggtggaggacggccacctggcatcc
gaagacatctccaactatcagcactgtgattggtcggtgtggccccgtgacgtcctgcag
tgtctggagtgtgtggtgtgtctggagaactttgcgagtgaggagctgctcatggccctg
ccctgcggccacgtgttccaccagcactgcatcgtggtgtggctggcctccggcagacac
tgctgcccggtgtgtcgctggcccagctacaagaagaagctgcagggggctgcaatcaga
agctccacgggaaaccccctgcaggactga
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