Pseudochaenichthys georgianus (South Georgia icefish): 117453996
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Entry
117453996 CDS
T09629
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117453996 (prom1a)
04090 CD molecules [BR:
pgeo04090
]
117453996 (prom1a)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117453996 (prom1a)
CD molecules [BR:
pgeo04090
]
Proteins
117453996 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
Cyt_bd_oxida_II
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
117453996
NCBI-ProteinID:
XP_033948937
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Position
10:complement(8015955..8107628)
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AA seq
879 aa
AA seq
DB search
MWSTGVLLLLLAVFLASGELQLETEPRRLPPPGKLDFGYVPAGVYETLAHYEPGPIGILF
HLVQAFLYVVQPNEFPEDLLVKLAKEKFGAIQTEYQKPENIVLTLQAIYYEIGFVVCAAL
GLLFAVLVPIIGIFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVLC
AYAANQNLSSQVKNIRRLVNSNMRDLHTFVNDTPMQIDYLISQYATAKNKVIYDLDNIGP
LLGGRIHDRLDKEVHPALDRVLNMAGAMRETKEALENVSVGLEVLQEGTGKLNFNLSLVR
TSINRTLSDPGCHDEESDATSAQLCRNIRQSLSQLQIGANFTRLPKVADQLEKMTDVMRT
DLSAIVQKGYSSLNDTPNMVIEQTRSVVESVQGLMDGIGNNISSFSKVFPVQSCLSNFTI
AISHAHAKIEEYYPEIDKLDFYRWIGCIALCCMVVLVLAFNYLGLLCGTLGYDKHASPTT
RGCISNTGGTMLVAGVGFSIIFSLVLMGMVTVMFLLGGNMEKLFCEPFHTKEVFKVVDTP
YLVNPEWKNFIPGYMYNDSDLELTAESLYSTCKENKGIYSAMRLDKLFNISSFLNSTVFT
KDVVSQLEGVKMDLREIILLEAEGKQNLVDFSDAGLSEINYADYLEEVNKGVTVMDLLTY
ARELEAQTDLMPRGGLQSSLKGHIGTLRQIHAQQVIPMEQAMKYVRARSALNQSMRFLER
TASDLPNKVLAVLEAIEAAQYLISQNATHLINQETGKYTATIVGYFNQYIEWVKTSLALE
VAPCKPFSNMLDTAEIMTCSFVVDSMNTFWMGLGCSALFLLPSIILAVKLAKFYRRMDTE
DVYDDIETMPMKTMEIGNNGYHSERSQGIPNPMMTRGIY
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtaccggggtcttgctgctcctcctggccgtgtttctagcctccggagaactc
cagctggagaccgagccgcggagactccctcctccgggaaagttggatttcggttatgtt
cctgcaggagtttacgagactctggcccattacgaaccgggaccgatagggatcctgttc
cacctggtgcaggcgttcctgtatgtggtgcagcccaatgaattccctgaagatcttctt
gtcaagctggcaaaggaaaagtttggcgccattcagacggaataccaaaagccagagaac
atagtgctgactcttcaggccatctactatgagatcggcttcgtggtctgtgcggcgctc
ggcctgctgttcgccgttctggttccgataatcggcatcttcttctgcatgtgccgctgc
tgcgataactgtggcggcgagatgcaccaacgccagaggaaaaacgcagactgtcgacga
ggcctgctgggaactctgctcttctccacctcgctggtcatcacgatcggagtgctgtgc
gcctacgctgccaaccagaacctgagctctcaggtgaagaacatccggagattggtgaac
agcaacatgagggacctgcacaccttcgttaatgacacgccaatgcaaattgattaccta
atatcccaatacgccacagccaagaacaaagtcatctatgacctagataatataggtcca
ttattaggtggaaggatacacgatcggctggataaggaggtccatcctgcattggacaga
gttctcaatatggctggagctatgcgagagacgaaggaggctctggagaacgtcagcgtg
ggtctggaggttctccaggaaggaacggggaagctcaacttcaacctgagcctggtgcgg
accagcatcaaccgaacgctcagcgacccgggctgccacgacgaggagtcggacgccacc
tccgcccagctgtgccgaaacatccgccagtccctttcccagctgcagatcggcgccaac
ttcacacggctacctaaagtggccgatcagctggaaaaaatgaccgatgtaatgagaacg
gacctcagtgcgatcgtccagaagggctactcctctttgaacgacacaccaaatatggtg
attgaacagaccagaagtgttgttgagagcgtgcaaggtttgatggacggcattggaaat
aacatcagcagcttctccaaagtgttccctgtgcagagttgcctttccaacttcactatc
gccatcagccatgcccatgccaagattgaggagtactaccctgaaattgacaaactggat
ttctacaggtggattggctgtattgctctgtgctgtatggtggtcctggtcctggccttc
aactacctgggcctgctgtgcggcactctgggatacgacaaacacgcctcacctacgaca
cgaggctgcatctccaacacaggaggaaccatgctcgtggccggcgttgggttcagcatc
atcttctccttggtgctgatgggaatggtgactgtcatgttcctgcttggaggaaacatg
gagaaacttttctgtgagcctttccacaccaaagaagtcttcaaggttgtggacacgcca
tatctggtcaacccagagtggaagaacttcatcccgggctacatgtacaacgactcggac
ctggagctgacagcagagagcttgtacagtacttgcaaagagaacaaaggcatctactca
gccatgcgcctggacaaactcttcaacatatcctccttcctgaactctacagtgttcacg
aaggatgtggtgagtcagctggagggcgttaagatggacctgagggaaataatcctgttg
gaggccgaggggaagcagaacctcgtggatttctctgacgcagggctgtcagaaatcaac
tatgcagactacctggaagaggtcaacaaaggagttacagtgatggacctgctcacgtat
gccagagagctggaggcgcagacagacctcatgcccagaggcggtctgcagagctctctg
aaaggtcacatcggcactctgcgtcagatccacgctcaacaggtcatccccatggagcag
gccatgaaatatgttagagcgaggagcgcgttgaaccagagtatgaggttcctggagaga
acagcttccgacctgccaaacaaagttttagcagttctggaggcgattgaagcggcccag
tacctcatctcccagaatgcaacacatttaatcaatcaggaaacgggaaaatacacagcc
accattgttggctacttcaatcaatacatagagtgggtcaagacctcactggccttagag
gtcgcaccgtgcaagcctttcagcaacatgctggacacggcggagatcatgacttgcagt
tttgtggtcgactccatgaacaccttctggatgggcctgggctgcagcgctctcttcctg
ctgcccagcatcatcctcgctgtgaagctagcaaagttctaccgcaggatggacacagag
gacgtttacgacgacattgagacaatgcccatgaaaactatggaaattgggaataatggt
tatcatagtgagaggtcacaaggtatcccaaatcctatgatgacaagggggatctactaa
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