Pseudochaenichthys georgianus (South Georgia icefish): 117454034
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Entry
117454034 CDS
T09629
Symbol
lamp2
Name
(RefSeq) lysosome-associated membrane glycoprotein 2 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03272
Virion - Hepatitis viruses
pgeo03273
Virion - Lassa virus and SFTS virus
pgeo04140
Autophagy - animal
pgeo04142
Lysosome
pgeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117454034 (lamp2)
03272 Virion - Hepatitis viruses
117454034 (lamp2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117454034 (lamp2)
04142 Lysosome
117454034 (lamp2)
04140 Autophagy - animal
117454034 (lamp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117454034 (lamp2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117454034 (lamp2)
04090 CD molecules [BR:
pgeo04090
]
117454034 (lamp2)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117454034 (lamp2)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
117454034 (lamp2)
Other autophagy associated proteins
RNautophagy/DNautophagy
117454034 (lamp2)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117454034 (lamp2)
CD molecules [BR:
pgeo04090
]
Proteins
117454034 (lamp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Extensin_1
Cementoin
Motif
Other DBs
NCBI-GeneID:
117454034
NCBI-ProteinID:
XP_033948974
LinkDB
All DBs
Position
10:complement(14898566..14914102)
Genome browser
AA seq
515 aa
AA seq
DB search
MYRCATFVVFLVLGIAIQLSNGTEVNVKDKDNNLCLYAKLMVNFKVSYEVAVNEILTAEF
DLPASVASDGSTCDNISSTLKLNFGEGHSWSVNFTTEGKLYHVDTITFSYNLSDASIFPN
STSTETTTIYVKPQITDVGVDTCYSCKSEDTYETDLVHQTLWNVLIQAFVINNSTSENIT
PCAADVSPTTPAALTTTTDSTTTDAPVTNSTTTDAPVTTDAPVTTDAPVTTDAPVTNSTT
TDAPVTNSTTTDAPVTNSTTTDAPVTNSTTTDAPVTNSTTTDAPVTNSTTTDAPVTNSTT
TDAPPTNSTTTAPPPTPTPTPTLPAPTTGKYMLQPDVNSTACLLADFGLRFKIKDEEMNF
EPNGTAVTGKCEVNSSELVLTSSTVTIKFTFTNDTKKFRLHALNVTGKTSSGVAFSVANT
NLSLWEAAVGSSYMCNKEQNYTISADLSIYTFELRVQPLAVKKGIFSTAEDCQADGDSFL
VPIAVGVSLLVLILIVLLAYFIGRKRNMTVGYESF
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgatgtgctacattcgttgtgtttctcgtccttggaattgcgatccagctgtca
aacggcactgaggtcaatgtcaaagacaaagacaacaatttatgcctctatgctaaatta
atggtcaacttcaaagtctcttatgaagtcgccgtcaatgagatcttaacagcggagttt
gacctccctgccagtgtcgcatcagatggaagtacatgtgataacataagctcaacgttg
aagcttaattttggagaaggacactcatggagtgtaaacttcaccacagaaggaaaactc
taccatgtagacaccatcaccttttcctacaacctcagcgacgcaagcatcttccctaac
tccacatcaaccgaaaccacaacaatctatgtgaagcctcaaatcacagatgtaggagtg
gacacctgctactcatgtaagagtgaagacacgtacgaaactgatttggtccatcagacg
ctgtggaacgtgctcatacaggcttttgtcattaacaacagcacaagtgaaaacattact
ccctgtgctgccgatgtatcaccaacaactcctgctgctctcaccactaccaccgactca
actaccaccgatgctcccgtcaccaattctaccaccaccgatgctcccgtcaccaccgat
gctcccgtcaccaccgatgctcccgtcaccaccgatgctcccgtcaccaattctaccacc
accgatgctcccgtcaccaattctaccaccaccgatgctcccgtcaccaattctaccacc
accgatgctcccgtcaccaattctaccaccaccgatgctcccgtcaccaattctaccacc
accgatgctcccgtcaccaattctaccaccaccgatgctcccgtcacaaactcaaccacc
accgatgctcctcccaccaactctactaccactgctcctcctccgacacccaccccgacc
cccaccctccctgcacccaccactgggaagtatatgctccagcctgatgtcaacagcacg
gcctgcctgctggccgactttggcctgcggtttaaaatcaaagatgaagagatgaacttt
gagcctaatgggaccgcagtcactgggaaatgtgaggtgaacagcagtgagctggtgttg
acgtccagcacagtaaccatcaagttcactttcaccaatgacaccaagaaattccgcctt
catgctctgaacgtcacaggaaagacaagctctggtgtggcgttttctgtcgccaacacc
aacctgagtctgtgggaggcggccgtcggcagctcctacatgtgtaacaaggagcagaac
tacaccatcagcgccgatctcagcatctacacctttgaactcagagtgcagccccttgca
gtcaagaagggtatcttcagcacagctgaggattgccaggctgacggggacagcttcctt
gttcccatagctgtcggagtttccctgcttgttctcattcttatcgttctgctggcctat
ttcatcgggagaaagagaaacatgactgtcggctacgagtctttctag
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integrated database retrieval system
