Pseudochaenichthys georgianus (South Georgia icefish): 117454067
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Entry
117454067 CDS
T09629
Name
(RefSeq) cohesin subunit SA-1-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117454067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117454067
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117454067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DHR-2_Lobe_C
HEAT_2
YqaH
NNH7
Motif
Other DBs
NCBI-GeneID:
117454067
NCBI-ProteinID:
XP_033949035
LinkDB
All DBs
Position
10:12202981..12254845
Genome browser
AA seq
1223 aa
AA seq
DB search
MAAGDSSFESLDEIGNFSDSGSDYEATLTSTKRKKQAVTGPKLPKRPRHKAALRGSSLSS
TSSSIPTPPTPPLQQQQQQSRGRSKQASPRPVTREKEGNRGISAKDIYDAVRSGKSAMVT
VVDEWLDSYKQSREAGLLVLINFIVQSCGCKGVVSREMLDSMQNAEIISTLTKEFNEESV
NYPLCTPGPELRRFKASLCEFTRVLVRSCRNSLIFDEYLFPSLLALLTGLSDSQVRAFRH
TSTLLAMKLMTGLVEVAVIVSVQQQTTQRQYDQENSKRASDRASDGLEELRATISQLREN
KEEVSSMMNATFRGVFVHRYRDRLPEIRAACIEELGVWLINDPEDFLNDGCMKYLGWTLH
DKQSPVRLQCVRALQAVYQEKEFIGRLELFTSRFKERMLGMVLDKDLDVAVEVVNLLLLI
QQSTEGGLREEECGHIYPLVYASNRGLASAAGVFLFNKLKNVIGSENQVNGTSGNADLLQ
ILISFYMQSEFHEHGAYLVDSLWGVAKAELRDWETMTTVLLKESGLMYEEEGALVELMIC
ALRQAAQASPPVGRTQSKKLLSMKDKKAQEHDRRRLTMHFIPLLPQLLAKYSADAAIVTL
LLKAPLYFNLEMYNSVPRLEKHLDQLLFQLCGIVEKHTAVTVLQACATLFSALCADSYTF
SSRSHLAFSQLLDGLTECFSSYLSDLLQGTADDDSVYSAATTLKRIAALSSAKDTTVWKL
FDPCLELLKSRIESRDLDKELMVPALKCAAFNLMWAKMNAVNSTPAEEELKRLKKEMRSF
CKVCEMCLSLNQTEIRDQAFELLCDLLLLYSQTSVCSAPALQTLVLLPSDSLRSEMAAFL
VDYVFSDSDDDELNVEEEMKITLLRRKRNQLAGYCKLVIYGVLDLNAATAVFKHYSKYFK
DFGDIIKETVSKSKLISPVQSAKTVCLSLQQLFSEMLTEDHSQQDLSEIRELAKKLAMSF
GVDLHRVRKPLVALHMDGIHFAFRKPREGEETNMNLAFLEILSEFSFKLLRQDRTQLAAY
LKSECPSAALSWPSVRMYQCSLEGRSSSKPREKEGGDAASSHDTPAAKRKRTTTPGSVAS
SARESLLDSLSFPSNLPTPALTSTALRVGAKQKAASGATQSDEGSGFTEPESEDDFSIGF
TMRKVKPAKQCHLSSSQTGTSLDQRDLNSNLTLLSLIEDGEEEEAEEEEPEIDDYESGSD
HESEFSLPSTRQTSASVLDELFD
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggcagctggagactcctcatttgaaagtcttgacgagataggcaacttctcggattct
ggcagtgactacgaggcgacattaacatccacaaagcggaaaaaacaggcagtgactggt
ccaaagctacccaagagacccaggcataaagctgcattgagggggtccagcctcagtagc
actagcagctccatccccacccctccaaccccccccctgcagcagcagcagcagcagtcc
cgagggagatccaagcaggcctctcctagaccggtgacgagagagaaggaggggaaccgg
ggaatcagtgcaaaggatatctatgatgctgtccgctctggaaagagtgccatggtgacg
gtggtggacgagtggctggacagctacaagcagagccgagaggcggggctgctggtgctc
atcaacttcattgttcagtcctgcggatgcaaaggtgtggtgagcagagagatgttggac
agcatgcagaacgctgagatcatcagcacgctaaccaaagagtttaatgaggaatcagtg
aactaccctctgtgtactccaggccctgagctgaggcgtttcaaagccagcctgtgtgag
tttactcgggttctggtgcgctcctgtaggaacagccttatttttgacgagtacctgttc
ccctccctgctggctctgctcaccggcctgtccgactcgcaggtcagagccttcagacac
accagcaccctgctcgccatgaagctgatgactgggctggtggaagtggctgtcatcgtg
tctgttcagcagcagaccacccagcggcaatacgaccaggagaacagcaagagagcatct
gacagagcctctgacggactggaggagctgcgggccaccatcagtcagctgcgggagaac
aaagaggaggtatcctccatgatgaacgctacgtttcgtggtgtgtttgtgcaccgttac
cgggaccggctgcctgagatccgggctgcttgtattgaggagttgggcgtttggctgata
aatgaccccgaagactttctgaatgacggatgtatgaagtacctggggtggaccctacat
gacaagcaaagtccagtgcgtctgcagtgtgtccgtgccctgcaggccgtgtaccaggag
aaggaattcattggccgcctggagcttttcaccagcagatttaaagagaggatgctcggc
atggtgctggacaaagacctggatgtggcagtggaagtggtcaatctgttgctgctgatc
caacagagcacagagggtggtctgagagaggaggagtgcggacacatctatccgctggtc
tacgcttcaaaccgaggcctggcgtctgccgctggcgtcttcctcttcaacaagctgaaa
aatgtgattggcagtgagaaccaggtgaatggtacaagtggaaatgcagacctccttcaa
atcctcatctccttctacatgcagagtgagttccacgagcacggggcgtacctggtggac
agtctgtggggcgtggcgaaagctgagctgagagactgggagaccatgaccacggttctg
ctgaaggagtctggtctgatgtacgaggaggagggggctctcgtagagctgatgatatgc
gccctcagacaggcagcacaggcgagcccccctgttgggaggactcagagcaagaagctt
ctcagtatgaaggataagaaagcccaggagcatgacaggaggcgcctcaccatgcacttc
atcccgttactgccacagctgctggccaagtactcagcagatgcagcgattgtgactctc
cttctcaaagctcccctctactttaacctggagatgtacaacagcgtgccgcggctggag
aagcatctggaccagctgctgtttcagttgtgtgggatcgtggagaagcacacggcggtc
actgtgctgcaggcttgcgccaccctgttcagcgccctctgtgccgacagctacaccttc
tcctcccgctctcacctggccttcagccagctgctggacggcctgaccgagtgcttcagc
tcctacctgagcgacctgctgcagggcactgcagatgacgatagcgtctacagtgcagcc
actactctgaagaggattgcagcactgagcagtgccaaggacacgacagtctggaagctg
ttcgacccttgccttgagcttctgaagagtaggattgagtccagagacctcgacaaagag
ctcatggtgccggctctgaagtgtgctgcctttaacctgatgtgggctaaaatgaacgca
gtcaactcaactccagctgaggaggaattaaagcgtctgaagaaggagatgcgctcgttc
tgcaaagtgtgtgagatgtgtctgtctctgaaccagacggagatcagagatcaggcgttc
gagctgctgtgcgacctgctgctcctgtacagtcagacttcggtctgctcggcgcccgcc
ctccagacgctggtcctcctgccctcagactccctgcgctctgagatggctgcgttcctc
gtggactacgtcttctctgactctgatgatgacgagctcaatgttgaggaggagatgaag
ataacgcttctccggaggaagcgcaaccagctggctggctactgtaagctggtgatctac
ggcgtgctggacctcaacgccgccaccgcagtcttcaagcactacagcaagtactttaaa
gactttggcgacatcattaaagagaccgtaagcaagagcaaactcatcagccccgtccag
agcgccaagacggtctgcctcagtctgcagcagctgttctcggagatgctgacggaggac
cacagccaacaggatctcagtgagattagagaattggccaagaagcttgccatgagcttt
ggcgttgatcttcatcgcgtccgcaaaccactggtggccttgcacatggatggtatacat
tttgcatttcggaagccacgggagggggaagagacgaacatgaacttggccttcctggag
atcctcagcgagttcagtttcaagctgctgcgtcaggaccgcacccagctcgctgcctat
ctgaaatcagagtgtccctctgctgccctctcctggccgtccgtcaggatgtatcagtgc
tccttagagggccgctcctcctctaaacccagagagaaggagggaggagatgccgcctcc
tctcacgatacacctgcagctaaacgcaagaggaccactaccccgggttcagtggccagc
tcagccagagagtctttgttggacagcctcagtttccccagcaacctgcccacccccgcc
ctcacctccactgccctgagagtcggagccaagcagaaagccgcctccggagccacacag
agtgatgagggcagcggcttcactgagcccgagtctgaggatgacttctccatagggttc
actatgcgcaaggtgaagcccgccaagcaatgccatctctcctccagccagaccggcacc
tctctggatcagcgggacctgaactccaacctcacattactctctctgattgaggatggt
gaagaagaagaagcagaagaagaagagcctgagattgatgattatgagagtggctccgat
catgaatctgaattttcactgccctccacgcgccaaacctccgccagcgtcctcgatgag
ctctttgactga
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