Pseudochaenichthys georgianus (South Georgia icefish): 117454118
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Entry
117454118 CDS
T09629
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04060
Cytokine-cytokine receptor interaction
pgeo04068
FoxO signaling pathway
pgeo04110
Cell cycle
pgeo04218
Cellular senescence
pgeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117454118 (tgfb5)
04350 TGF-beta signaling pathway
117454118 (tgfb5)
04068 FoxO signaling pathway
117454118 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117454118 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117454118 (tgfb5)
04218 Cellular senescence
117454118 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117454118 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
pgeo00536
]
117454118 (tgfb5)
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Transforming growth factors (RSTK binding)
117454118 (tgfb5)
Glycosaminoglycan binding proteins [BR:
pgeo00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117454118 (tgfb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DAN
Motif
Other DBs
NCBI-GeneID:
117454118
NCBI-ProteinID:
XP_033949108
EnsemblRapid:
ENSPGEG00000021073
LinkDB
All DBs
Position
10:complement(17089188..17098041)
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AA seq
422 aa
AA seq
DB search
MWLLRLALLLLLLLGFSGVLLVEGFNTCHSINLDAQKSRRIEAVRGQILSKLRIRTPPDK
DDEDPPSGSVTPEVVLLYNSTRELLKERARLAESACDRESSEEDYYAKEVQRIDMLPPRT
NTNAVQPSAPNPHYREVHFDVSGVDLTNSSLTKAEFRIFRAPNLQAGASEQRVEIYQLLK
ADEETTSTHRYIDSRTVQPKAKGAWMSVDVTETIKDWISDPGNNLGLKLGVHCPCCTFVP
STNNIVPNKSEELEALFAGVDDELLRQMRKPGKVKGQADFSTKTPHLILTMLPSDRVDNL
PKKNRKKRAAAAETTTCSRGSEQGCCLRSLYIDFRRDLNWKWIHEPKGYKANFCAGNCPY
IWSANNHYNMILPLYNKLNPSASASPCCVPQDLEPLTIMYFIGRTPRVEQLSNMVVKSCK
CR
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgctccgcctcgcgctgctgctgctgctgctgctcggattctccggtgtttta
cttgtggagggcttcaacacgtgccactccatcaacctggacgcgcagaagtcgcggcgc
atcgaggcggtgcgcgggcagatcctcagcaagctgcgcatccgcaccccaccggacaag
gacgacgaggaccctccctccgggtccgtgaccccagaggtcgtgctgctctacaacagt
acgcgggagctgctgaaggagcgtgcgcggctggccgaatccgcgtgcgaccgcgagagc
agcgaggaggattattacgccaaagaagttcagaggattgacatgctgcccccccgcacc
aacacaaacgcggttcagccatcagcccccaacccacattacagagaggtccactttgac
gtcagtggagtggatctgaccaacagctcgctgacgaaggccgagttcaggatcttcaga
gctcccaacctgcaggccggggcctcggagcagagagtggagatctaccagctgttgaag
gcagatgaggagaccacctccactcaccgttatatcgactcccgcaccgttcagccgaag
gcgaagggagcctggatgtctgtggacgtcaccgaaaccatcaaggactggatttcagat
ccaggtaataatctgggcctgaagttgggcgtccactgtccctgctgcaccttcgtgccg
tccaccaacaacattgtgcccaacaagagtgaggagctggaggctctgtttgcaggtgtg
gatgacgagctgctccgtcagatgagaaagcccggtaaggtcaaaggtcaggcagacttc
agcaccaagacgccgcacctcatcctcaccatgctgcccagcgacagagtggacaacctg
cccaagaagaaccgcaagaagagggcggccgccgcagaaaccaccacctgctcccgtggc
tctgagcagggctgctgtctgcgctcgctctacatcgacttcaggcgggacctcaactgg
aagtggatccacgagcccaaaggctacaaagccaacttctgcgccggcaactgtccttac
atctggagcgccaacaaccactataacatgatcctgccgctgtacaacaagctgaacccc
tcggcctcggcctcaccctgctgcgttcctcaggacctggagcccctcaccatcatgtac
tttataggtcgcacacctcgggttgagcaactctccaacatggtcgtcaagtcctgcaag
tgccgctga
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