Pseudochaenichthys georgianus (South Georgia icefish): 117454119
Help
Entry
117454119 CDS
T09629
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117454119 (lingo2)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117454119 (lingo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
ig
Ig_2
LRR_14
LRR_EndoS
V-set
LRR_6
LRR_RPS2
LRR_9
LRR_LRWD1
C2-set_2
C2-set_3
DUF7617
Motif
Other DBs
NCBI-GeneID:
117454119
NCBI-ProteinID:
XP_033949109
LinkDB
All DBs
Position
10:10586546..10827341
Genome browser
AA seq
613 aa
AA seq
DB search
MVDGMSRVMLHTVVSCWQPFLGLALVAVFAGATLGCPSRCECSAQTKAVVCHRKRMPTIP
DGIPTETRILDLSKNKMTMINPDDFFAFPGLEELDLSGNIISYVEPGAFNALFTMHSLSL
KSNRIKLIPLGVFTGLTNLTRLDISDNKIVILLDYMFQDLHNLRFLEVGDNDLVYISHRA
FSGLLGLEMLTLERCNLTVVPTEALSHLHNLVSLHLRYLSINTLHPYSFKKLFRLRHLEI
DNWPSLDHVPANTLHGLNLTTLSMTNTNMSSFPYQALKHLPYLTHLNLSFNRIRHIEGAM
LMELVRLKELHLVGAQLTTIEPYAFQGLRGLQVLNVSHNRLDTLEKGVFQSPEALEALLI
DNNPLTCDCRLMWLLQKRPSIFYGELQPECSTPEGNRGRPFQEFKDTLLSYYVTCTKPKI
RENKTQTITVDEGQQAMLRCSAEGKPRPVVSWMSPRRRVLTSRSHGRVTVHNNGTLEIKS
AEVHDGGVYLCLASNSAGNDTLMTSLAVKSLGSLYANRTQHYTDPSNSTANGTAGVTLGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDVEYVPRSKSNGTNVDSAE
GQAGGRRFNMKMM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacggtatgagcagagtcatgctgcacacagtcgtctcatgctggcagcccttc
ctgggactggccctcgtggctgtcttcgcgggtgccactctgggatgtccctcccgctgc
gagtgttcggcgcagaccaaggcagtcgtctgccaccgcaagcgcatgcctaccatcccg
gacggcatccccacggaaaccaggatcctagacctgagtaagaacaagatgacaatgatc
aaccctgatgacttttttgcctttcctgggcttgaggaacttgacctcagtggaaatatt
atcagttatgttgagcctggggcttttaacgctctgtttaccatgcactctctcagtctc
aagagcaatcgaatcaagctcattcctctgggcgtcttcacaggcttgacaaatcttacc
cgactggatataagtgacaacaaaatcgtcatccttctggattacatgtttcaggacttg
cacaatctgaggtttttggaagtgggggacaacgatctggtttacatttctcaccgtgca
ttcagtggacttttaggcctggagatgctaaccttagagaggtgcaaccttactgttgta
cccactgaggccctttcccacctgcacaacctggtcagtctccatctacgatacctcagc
atcaacaccttgcatccctactcgttcaaaaagctgttccggctgcggcatttagagatt
gataattggccatccctagaccatgtgccagccaataccctgcatggcctcaacctgacc
actctgtccatgaccaacaccaacatgtcctcattcccttaccaggccctgaagcatctg
ccctacctgacccacctcaacctgtccttcaaccgcattaggcacattgaaggtgctatg
ctgatggagctggttcggcttaaagagctccatctggttggagctcagctaaccaccatt
gaaccgtatgccttccagggcctgcgggggctccaagtcctcaatgtctctcacaaccga
ctggatacactagagaaaggtgtttttcagtctcctgaggccctggaggctcttttgatt
gacaacaaccccttgacgtgtgactgtcgtctcatgtggctcctacagaaaaggccctcc
atcttctatggggaactgcagccggagtgcagcacgcctgaaggtaatcgtggcagacct
ttccaggagtttaaggacacgctcctgtcttattacgtgacatgtaccaagccaaagatc
cgtgagaataaaacacaaaccatcacagtggatgagggccagcaggccatgttgcgttgc
agtgctgaagggaaacccaggcccgttgtgtcctggatgtccccacggcgacgagtcctg
acaagcaggagccatggaagagtcaccgtccacaacaatggtactctggagatcaagtca
gcggaggtgcatgatggcggagtgtatctttgcctcgcctccaatagtgctgggaatgac
accctgatgacatccttggcggtgaaaagcctgggatcgctgtacgctaacaggacccag
cactacacagatcccagcaacagcactgccaacgggacggctggtgtgaccctcggtttg
gacctaaagactattttagtgtccactgcaatgggttgtttcacattcctgggagtggtc
ttgttttgtttcctgctccttttcgtttggagcagagggaaaggaaaacataaaaacaac
atagatgttgaatatgtgcctcgatcaaagtctaatggcactaacgttgactcggcagag
ggacaagctggtggtcgtcgttttaacatgaaaatgatgtga
DBGET
integrated database retrieval system
