Pseudochaenichthys georgianus (South Georgia icefish): 117454179
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Entry
117454179 CDS
T09629
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04120
Ubiquitin mediated proteolysis
pgeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117454179 (syvn1)
04120 Ubiquitin mediated proteolysis
117454179 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117454179 (syvn1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117454179 (syvn1)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117454179 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
Prok-RING_4
FANCL_C
Motif
Other DBs
NCBI-GeneID:
117454179
NCBI-ProteinID:
XP_033949193
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All DBs
Position
10:33243108..33252416
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AA seq
634 aa
AA seq
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MVRAALVTATSLALTGAVVAHAYLLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLAILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYLLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRATTNNQTPAPAQAPPPAPAAPANAP
AAPPPNVAPGMLPGFPPGVFPFWGPFPAVHPPAAAAAAPGNTNAPQSSTEATQAAGSAAG
SSTADAAAGAAAPGSAIPGFPFSYPPPPFPSAPWMPMPPPPPFVSSMPPPPPSLSQLSED
ELRQLEADGRQGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLSPPRAEASTAEASGTN
TTPPSASAEPPAASTSTDSQEKDSSSSEQAEAASSQAADSTSIASDMDTKEETEDGVAGG
DGEEDAEPNTSELRRRRLRKLETSSPSSSPPPDN
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttggtgaccgccaccagcctggctctgaccggggccgtggtggca
cacgcttacctcctcaaaaaccagttctacccgaccgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacatccaggcctttgtgttggtgtttctgctgggaaagttc
atgaggaaggtcttcttcggacagctcagggctgcggagatggagcatctcatcgagcgc
tcctggtacgccgtgaccgagacgtgcctggccttcaccgtgttcagggacgacttctcc
ccgcgcttcgtggccctcttcaccctcctgctcttcctcaagtgcttccactggctggct
gaggacagggtggactttatggaacgcagtccgaacatatcttggatttttcacttccga
gtgttatctctcatgggactgctggctatcctggacttcctgtttgttaaccacgcctgc
cacagcatcatcaccagaggagcctcagtccagctcgtctttggatttgagtacgccatc
ctgatgaccatggtgctgaccaccttcattaagtacctcctgcacaccgtggacctgcag
agtgagaacccctgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaagtgctgctgtacatcgccttcatgaccatcatgatcaaggtccacaccttc
cccctgtttgccatccggcccatgtatctggctatgaggcagttcaagaaggctgtgaca
gacgccataatgtctcggagagccatccgcaacatgaatactctataccctgatgctact
cctgaagacctgctggcctctgacaacgtctgcatcatctgccgggaggaaatggtcact
ggagccaagaaactgccttgtaatcacattttccactccagctgcctccgctcctggttc
cagagacagcagacctgcccgacctgtcgtatggacgtcctgcgtgcgaccactaacaat
cagactccagcccccgcccaggctccgccccctgctcctgcagcccccgccaacgccccc
gcagccccgccccccaatgtggccccaggcatgttacctggcttcccccccggcgtcttc
cccttctggggtcccttccctgcggtgcatccccctgctgcagccgccgcagcccccggg
aacaccaacgctcctcagagcagcacagaggccacacaggcagccgggagcgcggccggt
tcgtcgactgcagacgccgcagcaggtgcagctgctccaggatcagccatcccaggcttc
cccttctcctaccccccgccccccttcccctctgcaccgtggatgcccatgcctccacct
ccccccttcgtgtcttcgatgcccccccctcccccctccctgtcccagctgtcagaggat
gagctgaggcagctggaggcagacggtcgtcagggtctggaggctcggctgcagtgtctg
cagaacatccacacgctgctggacgccgccatgctcaacatccaccactacctcagcacc
gtggccacactcagtcctccccgggctgaggccagcactgcagaagccagcgggacaaac
accacccccccctctgcttccgctgaaccccccgcagccagcaccagcacagacagccag
gagaaggactccagcagctctgagcaggcggaagcagcttcttcgcaggcggccgactct
acatccatcgcctcggacatggacacaaaagaggagacggaggatggagtggcggggggg
gatggagaggaggacgcagagcccaacacctcagagctgaggcgccgccgcctccgtaag
ctggagacgtcgtcgccgtcctcctctccgcctccggacaactga
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