Pseudochaenichthys georgianus (South Georgia icefish): 117454180
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Entry
117454180 CDS
T09629
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117454180 (rnf20)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117454180 (rnf20)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
117454180 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
CC_Bre1
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
117454180
NCBI-ProteinID:
XP_033949194
LinkDB
All DBs
Position
10:complement(22538426..22550364)
Genome browser
AA seq
1016 aa
AA seq
DB search
MSGQKRPSDPCGPSSSGAPPEKRREREGEDGTPGVSTGGSTAVETVIKLGGVSNSEEQDI
RALQTKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDENVQLTI
RRYDQASSEPEKSQTGEGRSLKPDTPEPDGDSNQERAKDRGNQGEPNNSFLATLASSSSE
EMEAELQERVEKSQKQASHVVEIYECLKRTVDQLKTELDSGADSSLWQAASKQNTLLTNE
NKRLQQLTEDFKQKHSHMTSQTRPLGRAANKADQRVSELQVLIEELQWDMEKIRRRENRL
NAHLTEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSDMEENTELADNRFVELQKL
QQDLQSVHQENNNMKAELLIRAEGVVKETAEYRCLQSQFSVLYNESLILKSQLDETRARL
NTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANEQA
GPINREMRHLISTLQTHNQQMKVEVVKYKIRLRETQAELNQVRASKGNAILQSQSSTEMD
VKDETTSPSTPAISGEPVVKSEADNGSSTPSSTGASVKTESGAEPEATVKEEEKDEKKEK
EEKREKDIIKKEEKDREREKEKEKERERPTRSSVMKEERTGCSQPEESAGERPSIGGSKR
KEMEQLKIIRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKSKSEGEELRQR
LRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDVTGQAFE
DMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQ
VVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQESAVLSEEVRTQLEQVQQRLKL
VREEVIENSISREKESFNARRAQEDISKLRGKIEKAKKPAEKISNGDDILNEEISDYKAR
LTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagaagcgtccttcggacccctgcggcccctcgtcctccggggcgccgccg
gagaagcggagggagagggagggagaggacggaacccccggtgtcagtaccggggggagc
accgcggtggagacggtcatcaaactgggaggggtgtccaactcagaagaacaagacatc
agggctctccagacaaagaaccgaaagttgggagaatctcttgatcaaagacaggtcatt
gaggatgaattgcgagagcgaattgagagactggagacccgccaggccactgatgatgcc
agtctgctgatcctcaacagatactggaaccagtttgatgaaaacgttcaactgaccatc
agacgttatgaccaagcgagcagcgagcctgagaaatctcagactggtgagggacggagc
ctgaagccggatactccagaacctgatggcgactccaaccaggagcgggccaaggacaga
ggcaaccagggagagccaaacaactctttcctggccacgttggcgagcagcagcagtgag
gagatggaggctgagctccaggagagggtggagaaaagccagaagcaggccagccacgtg
gtggagatttatgagtgtctgaagaggaccgtggaccaactgaagacagagctggactct
ggagctgacagcagtctgtggcaggcagcttccaaacagaatacactcctgaccaatgaa
aacaagcggctgcaacagctgacagaggactttaagcagaagcacagtcacatgaccagt
cagactcgtcctctgggtcgtgcggctaacaaagcggaccagcgtgtcagcgagctgcag
gtcctgatcgaggagctgcagtgggacatggagaagatccgccgccgcgagaacagactg
aacgctcacctgactgagatactggagagggtgaacagcaaaggctataaggtgtgtggg
gaggccagcagcgtttgtgggaccatcactattaacaagagaaagtttgaagaaatgaac
agtgatatggaggagaacacggagctggcagacaaccgcttcgtcgagctgcagaagctc
cagcaggacctgcagagtgtgcaccaggagaacaacaacatgaaggcggagctgctgatc
cgagcagagggcgtggtcaaagagactgctgagtatcgctgcttacagtcacagttttct
gtgctctacaacgagtctctgatcctgaagtctcagttagatgagacacgtgctcgtctc
aacaccaccaggacggcgaggctccgacagctggagcacatggagaatgacgaggtggct
ctgcagaggaaggttcgtacggaggtgtttcagctggaggacacactggctcaagtcagg
aaggagtacgagatgttgcgcattgaatttgaacagacgcttgctgccaacgagcaagca
ggtcccatcaacagggagatgcgtcacctgatcagcacgttgcaaacacacaaccagcag
atgaaggtagaggtggtgaaatacaagatcagactgagagagacgcaagctgagctcaac
caggtccgcgcctcaaagggaaatgccatcctccagtcccagtccagcacagagatggac
gtgaaggatgagaccacctctccttcgacaccagccatctccggggagcctgtggtcaaa
tcagaggctgacaacggctcctccacgcccagcagcactggagcctctgtgaagactgag
tctggagcagaacctgaagcaaccgtaaaagaggaggagaaagatgagaagaaagaaaag
gaggaaaagagagaaaaggacattataaagaaagaggagaaagacagagagcgtgagaaa
gagaaggaaaaggagagagagaggccgactcgcagcagtgtgatgaaggaggagaggacc
ggctgcagccagccggaggagtcggccggggagcgcccctccatcggggggtccaagagg
aaagagatggagcagctgaagatcataagagccgaactcaagaaagcccaggagtcccag
cgggagatgaagctgctgctggacatgtaccgctcagcgccaaaggagcagagggacaag
gtccagctcatggctgcagagaagaagtccaagtcagagggagaggagctgcggcagagg
ctgagggagcttgaggagagggagaggagggagggcaaaaagatggcggacgaagaagct
ctgaggaagatccgctctgtggaggagcagatcgacatcctcaacaagaagctctccata
gcaaaacaggaggaggacgccctgctgagcgagatggacgtgacggggcaggccttcgag
gacatgcaggaacagaacatccgtctgatgcagcagctcagggaaaaagacgatgccaac
ttcaagctgatgagcgagcggatcaagtccaaccagatccacaagctgctgaaagaggag
aaggaggagctggcagaccaactgctgactttaaaaacgcaggtggatgcccagctgcag
gtggtgaggaagcttgaggaaaaggagcgcctcctgcagggcaccatcagcactgctgag
agagagctggcccttcgaacacaagcgttagacatgaacaaacgcaaggctcaggagtct
gcggtgctgtcggaggaggtgcgaacccagctggagcaagttcagcagaggctcaaactg
gtcagagaggaggtcatagagaacagcatctccagggagaaagagtcctttaacgccaga
cgagcacaggaggacatctccaaactaaggggaaagatcgagaaggccaagaaacccgca
gagaaaatcagcaacggagacgacatccttaatgaagaaatcagtgactataaggcgcgc
ctaacgtgtccttgctgcaactcccgggtgaaggatgcagtcctgacaaagtgcttccac
gtcttctgcttcgagtgcgtaaagacacgctacgacacacgccagaggaagtgccccaag
tgcaacgccgccttcggagcgaacgacttccaccgcatatacatcggctaa
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