Pseudochaenichthys georgianus (South Georgia icefish): 117454204
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Entry
117454204 CDS
T09629
Symbol
nr3c1
Name
(RefSeq) LOW QUALITY PROTEIN: glucocorticoid receptor
KO
K05771
glucocorticoid receptor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117454204 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117454204 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pgeo03310
]
117454204 (nr3c1)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
117454204 (nr3c1)
Nuclear receptors [BR:
pgeo03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
117454204 (nr3c1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
GCR
Motif
Other DBs
NCBI-GeneID:
117454204
NCBI-ProteinID:
XP_033949237
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Position
10:complement(24191755..24215263)
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AA seq
783 aa
AA seq
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MDKGGVXKITYRRDDPLSKLVYTESPEEGGLLKVAPRSAMSFTSVVLPSTPLMQPGQVPN
GLSNSHLTELSSASVTATVGPLLEDPEPRGLIKIQKLHQQHFLQTQTSTTFGGQHFRESL
PQLEASTADINQSCMDSLIGGSDPNFFHTKTEDFSMDKGDQDPIDLDHAFDHIGKDVDVT
QKFFTDNTLDLLQDFELTGSPSDFYVGDDAFLSTLAADTLLGDVGSERDIKPALVESINS
SGTVSVSLNGSNMTSPGQSSPSISTTSSLTPTATLSAKVKKEKDAGFIQLCTQGGIKQEK
TSAGQSYCQISGAASTASMSTSNTISICGVSTSSGPSYHFGTTSSSNGAQQQKDQKPLSS
LFLPVTTIGGAWSRIQNIGDNSAMLRASEAFTSSSSYPISFSSSTSRQEIVPAQSSTKSG
THKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPAC
RFRKCLMAGMNLEARKTKKLNRLKGAQPSNPPELNPSPPIETRSLLPVKSMPQLVPTMLS
LLKAIEPDTIFAGYDSTLPDTSTRLMTTLNRLGGRQVISAVKWAKALPGFRNLHLDDQMT
LLQCSWLFLMSFGLGWRSYQQCNGNMLCFAPDLVINEDRMKLPYMADQCEQMLKISSEFV
RLQVSHDEYLCMKVLLLLSTVPKDGLKSQAVFDDIRMSYIKELGKAIVKREENSSQNWQR
FYQLTKLLDSMHEMVGGLLSFCFYTFVNKSLSVEFPEMLAEIISNQLPKFKAGSVKPLLF
HQR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggataaaggtggagtgnnaaagataacatatagaagagatgaccctttaagcaagtta
gtctacactgaaagccctgaggagggaggtctattaaaagtggctcctcgcagtgccatg
tccttcacctcagtcgttcttccatccaccccgttgatgcagccaggtcaggtgcctaac
ggcctcagcaacagccacctaacagaactctcctccgcctccgtcactgccactgttggc
cccttattggaagacccagagcccagaggcctgatcaaaatccaaaagcttcaccagcag
cactttctccagacacagacttccactacgttcgggggtcaacactttagggaaagtttg
ccccagttggaggccagtacagcagatattaaccaatcctgcatggattcacttattgga
ggatcagatcccaatttcttccacacgaaaacagaagatttttcaatggataaaggtgat
caggatcccattgaccttgatcatgcctttgatcacattggaaaagatgttgatgtgacc
cagaaatttttcacagacaacactctggacctgctccaagactttgagctcactgggtct
ccctcagatttttatgtaggggatgatgccttcctgtccactcttgcagccgatactctg
ctcggagacgttggctcagagagagacataaagcctgccttggttgagagcattaacagc
agtgggacagtctcagtttctctcaatggcagcaatatgacaagtccaggtcagtccagc
ccaagcatatccacaacgtcctccttaacccctacagccactttgtctgcaaaggtaaag
aaagaaaaagatgctggcttcattcagctctgcacccaaggcgggatcaaacaggaaaag
acgtctgcaggccagagttattgccaaattagtggcgcggcctccacagcgtccatgtcc
acatctaacaccatctccatctgtggggtgagcacttcaagtggaccaagctaccacttt
ggaaccacctccagcagcaatggagctcagcagcagaaggatcagaagccgttgtccagt
ctgtttctcccagtgacgaccatcggcggggcctggagccgaatccagaatatcggggac
aactccgccatgctcagggccagtgaggcattcaccagctcctcctcttaccccatcagc
ttttccagttctacctccagacaggaaattgtccctgcacagtcctcgacaaaaagtggg
actcataagatctgcctggtgtgctcggacgaggcctcaggctgccactacggtgtcctc
acctgtggcagctgcaaggtgttcttcaagagagcagtggaagggcagcataattacctg
tgtgctgggaggaacgactgtatcatcgacaagatcaggaggaagaactgccccgcctgc
cgcttccgcaagtgtctgatggctggcatgaacctggaagcgcgaaaaaccaagaagctg
aaccgcttaaagggcgcccagccgagcaaccctcccgagctcaatccctctcctccaatc
gagactcgttccctcttacccgtgaagtctatgcctcaacttgtccccaccatgctgtcc
ctgctgaaggccatcgagccagacaccatcttcgccggctacgacagcaccctgcccgac
acctccacccgcctcatgaccacactcaacaggctggggggccggcaggtcatctctgcc
gtcaagtgggccaaggctctgccaggcttcaggaacctgcacctggacgaccagatgact
cttcttcagtgctcctggctcttcctcatgtccttcggcctgggctggagatcctaccag
cagtgcaacggcaacatgctgtgcttcgccccagacctcgtcatcaacgaggaccggatg
aagctgccttacatggccgaccagtgcgagcagatgctgaagatctccagcgagttcgtc
cgcctgcaggtttcccacgacgagtatttgtgcatgaaggtgctgctgctgctcagcaca
gtgccaaaggacggcttgaagagccaggcggtgttcgacgatattcggatgtcgtacatt
aaggagctggggaaagccatcgtgaagcgcgaggagaactccagccagaactggcagcgg
ttctaccagctcaccaagctgctggactccatgcacgagatggtgggtgggctgctgagc
ttctgcttctacacctttgtgaataaatccctgagcgtggagttcccggagatgctcgcc
gagatcatcagcaaccagctaccaaaattcaaggccgggagcgtcaaacctctcctcttc
catcagagatga
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