Pseudochaenichthys georgianus (South Georgia icefish): 117454218
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Entry
117454218 CDS
T09629
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117454218 (pcdh10b)
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Protocadherins
117454218 (pcdh10b)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ustilago_mating
Motif
Other DBs
NCBI-GeneID:
117454218
NCBI-ProteinID:
XP_033949256
EnsemblRapid:
ENSPGEG00000016773
LinkDB
All DBs
Position
10:complement(36592831..36645373)
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AA seq
1014 aa
AA seq
DB search
MIVLLVVLCITDGVLAQIRYSVPEEADHGILVGNIAEDLGLDLTKLASRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDREQICKQSASCQLNMEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESAVPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLSE
NAPVGMLVIQLNATDMDEGLNGEIVYSFSNHISNRVKDLFSLDPRTGRIEVRGEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVVVKVTDLNDNAPEITFSTVTESVSEKASPGTVIALLS
VTDRDAEENGQIHVEIIGDVPFKLKTSFRNYFTIVTDGPLNREQADSYSITVVARDKGTP
SLATSKSIRVQVSDENDNLPTFTQPIYDVYVTENNVPGAYIHAVTALDPDIGLNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGTPELSTNSTVKV
IIVDQNDNAPLVLAPLGKNGTAKEPLPRTAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPHQLYDLLIEVRDHGQPPLSSSASVLVMLVDSVAE
GRGVGNRGGTAKAKEGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNIYSCLTS
ECCLGCSSCCSRQARARKKKLTKSDIMLVQSAGNVSGAGTAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAVVTGYTDQQPDIISNGSILSNETK
HQRAELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGKKRSAA
GADLFSNCTEECKALGHSDRCWMPSFGPSDGRQGPDYRSNLHVPGMDSVADTEVFESPEL
TADQSFSTFGKETPLSHQHHHHHLLKNHHHQQGSLERKEFVPYNPAYLTRKRVC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcttttggttgtcctgtgcatcacggatggagtgctcgcccagatacgctac
tctgtgccggaggaggcggaccatggcattttggtggggaatattgccgaggacctggga
ctggaccttaccaaactggcatcccgccgcttccaggtggtgcccagctctcggacaccg
tacctggaagtgaacctagagaacggcgtcctgttcgttaacgaaaagatcgaccgggag
cagatctgcaagcagagcgcgagctgccagctcaacatggaggtgttcttggagaacccg
cttgagctgtttcgggtcgaaattgaggtggtagacattaacgacaacccgcccagcttc
ccggagacagacatcacggtggagatctcagaaagcgccgtcccgggcacccggttccct
ctggagagcgcattcgacccggacgtgggctctaacgctttacggacgtatgatatcacc
actaacaactacttttacttggatgtgcagacccaaaccgacggaaacaagttcgcagag
ctggtcctggaaaagcctctggaccgggagcagcaggcggcgcacaggtacgtgctgacc
gcggtggacggcggccagcctccccgaactggcaccgcgctgctggtggttaaagtgctg
gactctaatgataacgtgccggtgtttgaccagcccgtttacacggtgagcctctcggag
aacgcaccggtgggcatgctggttatacagctgaacgccaccgacatggatgaaggacta
aacggggagatagtttattccttcagtaaccacatatccaaccgcgtaaaggaccttttc
agcctagacccgcgcaccgggcgcatcgaggtgcgcggagaggtggattttgaggagagc
agcttgtatcagatctttgtccaggccaaggacctggggccaaacgccgtggccgcgcac
tgcaaagtggtggtcaaagtcaccgatttaaacgacaatgctccggagatcaccttcagc
accgtcaccgagtctgtgagcgaaaaggcttctccgggcaccgtcatcgcgctgctcagt
gtgacggaccgggacgcagaggaaaacggacagatccacgtggagatcatcggtgatgtt
ccgtttaaattaaaaacatccttcaggaattatttcactatagtgactgacggtccgttg
aaccgggagcaggcagactcttactccattactgtggtggcgcgggataaagggacgccc
tctcttgccaccagtaaatccatccgagtccaggtgtcagatgagaacgacaacctgccc
acctttacgcagcccatatatgatgtgtatgtgaccgagaataacgtgccgggggcctac
atccacgctgtgacggccctggacccggacatcggcctgaacgcgctcatcagctactcc
atattagagtgtgacatccagggcatgtcagtgaaaacgtatgtgtctatcaatgaggag
acgggctatctgtacgcgctcaggtccttcgattacgagcagctgaaggatttcacattc
atggtgcaggccaaagacgcaggcaccccggagctgtccactaactccacagtcaaagtc
atcatcgtggaccagaatgacaatgcccccctggtgctggctcccttggggaagaacggc
acagccaaagagcctctgccgcgcaccgctgaaccgggctacttggtgacccgcatcgtg
gccatggatgctgatgacggagagaatgcccgtttatcctacagcatccagagggggaac
gaaaatggtatgttccggatggactggaggacaggtgagcttcgtacggctaggcgggtg
tctgccaaacgagacccccaccagctgtacgacctgctgatcgaggtgcgggaccacggc
cagccgccgctgtcctccagcgccagcgtgctggtgatgttggtggacagcgtggctgaa
ggccgcggcgtagggaacagggggggcacagccaaggccaaagaggggaccctggatctc
acccttatcctcatcatcgccctgggctccgtctctttcatattcctgctggtcatgatc
gtgctggccgtgcgctgccagaaggataaaaagctcaacatctacagttgcctgaccagc
gagtgctgcctgggatgcagctcgtgctgctcccggcaggcccgggcccgcaagaaaaag
ctcaccaagtcagatatcatgctggtgcaaagcgccggtaacgtcagcggggccggtacg
gctcaagtccccgtggaggagtcaggtagcttcggctctcaccatcaaaatcagaactat
tgctaccaggtatgtctgactccagagtctgccaaaaccgacctcatgttcctaaagccg
tgtagtccgtctaggagcaccgacaccgaacacaacccgtgcggggccgtagtgacaggg
tacacagaccagcagcccgacatcatatcaaatggcagcattttatcaaacgagaccaaa
caccagcgagctgaactcagctacctggttgacaggccgagacgcgtcaacagttcggcc
ttccaggaggcagacctggtcagctccaaagacagcggccacggagacagtgagcagggg
gacagcgaccacgacgccaccaaccgaggacattcctccggtaagaagcgctctgctgca
ggcgctgacctcttctctaactgcacagaggagtgtaaggccctaggccactcggaccgc
tgctggatgccgagcttcgggccctctgatgggcgccagggcccggactaccgcagcaac
ctgcacgtgcccggcatggactcggtcgctgacacagaggtatttgaaagccccgagcta
acggccgatcaatcattctccacctttggcaaagagacgcctctcagtcaccaacaccac
caccaccatctcctcaaaaaccatcaccaccagcagggctccctagagaggaaagagttt
gtgccctataacccggcttatttaacgcggaaaagagtttgctag
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