Pseudochaenichthys georgianus (South Georgia icefish): 117454223
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Entry
117454223 CDS
T09629
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117454223 (tmc5)
03037 Cilium and associated proteins [BR:
pgeo03037
]
117454223 (tmc5)
Transporters [BR:
pgeo02000
]
Other transporters
Pores ion channels [TC:
1
]
117454223 (tmc5)
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117454223 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117454223
NCBI-ProteinID:
XP_033949275
LinkDB
All DBs
Position
1:15733753..15752102
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AA seq
958 aa
AA seq
DB search
MTSYSNGGLFNPAYHDSETLEIDRRSSSKTPLHTNPYARGEGADGHYSTGQISSDDALRR
VPRGGWQEESWRGRESLPMGHISTRPRSPSWQHDINHSTFQIPPDSQYDRSLSIRLPSTT
SGNMTMRRRGISMRRMSMFPNGDPNHVAFTEDAIRNEMENEEQNLVKELVALSTRDRIWA
IRDLPMSFDEKKHIRSQVLAFKSAKKSRQFTCFADCSENMSLSFRRCGYGIRSARQTLEL
WQGIMKEIGGTFGTSVLSYFMFLKWLLMFNIFSFLVNFGFITIPQLVYSPWPNISPNVSF
RGLEILTGAGYFNNTVMYYGGYSNETKVHLVEYNMQLAYFFTIAVYMVLCGIALIFSMAS
SFKTNYVLADPASNSAWQLLCSWDFNITNDKAVRQRKNNLRVQLKESMSENAQRERLSLS
ESLKHFGVYLGAWLLSTSLAVGSGASIYYLCQFEQQRATDSANWSLLQEAETLLVPFVVS
LMNLVVPLFYSLFNKFEHYSSQRKQIYALVVRNVLLKMSILTVLCYNWMNVVAVKFSCWE
SMVGQALYRLVIVDFLFLMLGSFFGEFLSNVIGTRLLPHLGVPEFDVARNVLELIYAQTL
AWIGIYFSPLLPAIQILKFFILFYLKKVSLTQNCQPPRRSGRAAQMQTIFIALLFFPFFV
GAVSMVAFTAWSLTPSEHCGPFRGLNSTYNVVEVWMVHLKETSSSHWVVWIYQNVIRSEI
FYFLISLIIMVIIYIFWQVTRGRKLRIRVLRQQIVDEGKDKSFLLERLQNLQKSHPDKRS
KQKNPKKHSKRRPDDHSSGGQSTSNAMVQALLARQQLEKEEEERLSTGGVPVPSDISSFS
SALIQAMQARQRAEGQERNEHYSAGYYESPTNTSSAVTQAMQARQRAQVEGTDDASDPTS
SVSSVMMQVMQARQRAEKEDRPQWVPAPPQNPAPAGSSALIQAMLARQQAQNEYDDGY
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagtaatggaggattattcaaccctgcctaccatgacagcgagactctg
gaaattgatagaaggtcttccagcaaaacccctctccacactaacccctacgcccggggt
gagggtgcagatggacattactccactggtcagatcagcagtgatgatgctttaaggagg
gtgccgcgggggggttggcaggaggagagctggagggggagggaaagcctccccatgggc
cacatctcaacacggcctaggagtccttcatggcagcatgacatcaatcacagtaccttc
caaatcccacctgactctcagtatgatcgatcactttccatccgccttccttccacaaca
tcaggtaacatgacgatgagaaggaggggaatatcaatgagacggatgagcatgtttcct
aacggtgatcctaaccacgtagccttcacagaggacgccataaggaacgagatggagaat
gaggaacagaacctggtaaaagagcttgttgccctatcaacacgagacagaatttgggcg
attcgggaccttccaatgagctttgatgagaagaaacatataaggagccaagtgctggca
ttcaagtctgccaagaaatctcgccagttcacatgttttgcagactgctctgagaacatg
tcactgtctttccgcaggtgcggatatggtataagatcggccaggcagaccttggagctg
tggcagggcatcatgaaagagatcggtggcacgtttggcaccagcgtgctctcctacttc
atgttcctcaagtggctgctcatgttcaacattttctccttcctggtgaactttggcttt
attaccatcccgcagcttgtttacagcccctggcccaacatatctccaaatgtgagcttc
agaggactggagatactgactggagcaggttacttcaacaacactgtcatgtactacggg
ggctacagcaatgaaaccaaggtgcatctagtggagtacaacatgcagttggcttatttc
ttcaccattgcagtctacatggttctgtgtggaattgcacttatcttcagcatggccagc
tcattcaagacaaactatgtgctagcagaccctgcttcaaacagtgcatggcagcttctg
tgcagctgggactttaatattaccaacgataaggcagtgagacagcgcaaaaacaatcta
cgagtgcaactcaaggagtccatgtcagagaatgcccagagggagcgcctaagcctctct
gaaagtctgaagcactttggggtttatctgggtgcctggctgctctccactagcctggct
gtcggctctggagctagcatctattatctctgccaattcgaacagcagcgggcaacagat
tctgccaactggtctctgctgcaggaggcagagactctgctggttccctttgtggtgtct
ctgatgaacctggtcgtcccgctcttctactccctcttcaacaagtttgagcactactcc
agccagcgcaaacagatctacgcactggtagtcagaaatgtgttactcaagatgtccatt
ctgactgtcttgtgttataactggatgaatgtggtggctgtaaagttttcgtgttgggag
tccatggtaggacaggctttgtaccgactggtcattgttgatttcctttttctaatgttg
ggatccttctttggagagtttcttagcaatgtgattgggaccagattacttccacatctg
ggggttccagagtttgacgtagccagaaatgtccttgaactgatctacgcacagactctg
gcctggattggtatttacttttctcctctgctgcctgccatccagatcctcaaatttttc
attttgttttacttaaagaaggtcagcctgacccagaactgccagcctccgaggcggtca
ggcagagctgctcagatgcaaaccatcttcatcgccctgctcttcttccctttcttcgtg
ggagccgtctctatggttgcgttcaccgcctggagtctgaccccctcagagcattgtggt
cctttccggggactcaacagcacctacaatgtggtcgaagtttggatggttcacctgaag
gagacctctagttctcactgggtggtttggatctaccaaaatgtcatcaggagtgaaatc
ttctactttcttatctcactcatcatcatggtcatcatatacatcttctggcaagtcact
cggggccgcaagctccgtattcgtgtactgagacaacagattgttgatgaagggaaagac
aagtccttcttgttagagagactccaaaatctccaaaaatctcaccctgataaaagatca
aaacagaagaatccgaaaaagcactccaaacggaggccagatgaccactcctcaggcggt
cagtccacctcaaacgccatggttcaggcgttactcgctcgccagcagctcgagaaggag
gaagaggagagactcagcactggcggagttccagttccctccgacatctcctccttctct
agtgctcttattcaggccatgcaggcccggcagagggcagagggtcaagaaaggaatgaa
cactatagcgcaggttattacgaaagccccacaaacacatccagcgctgtcacacaggcg
atgcaagccagacaaagagcgcaagtggaaggaactgatgatgcaagtgatccaacttct
tctgtgtcaagtgttatgatgcaagtcatgcaagccaggcagagggcagagaaagaggat
aggcctcagtgggtcccggcacccccacaaaacccagcacccgcaggctccagcgcgctc
attcaggccatgttggcccggcagcaggcccagaatgagtatgatgatggctactaa
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