KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117454233
Entry
117454233         CDS       T09629                                 
Symbol
rack1
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03010  Ribosome
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    117454233 (rack1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgeo03019]
    117454233 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgeo04147]
    117454233 (rack1)
Messenger RNA biogenesis [BR:pgeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     117454233 (rack1)
Exosome [BR:pgeo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117454233 (rack1)
  Exosomal proteins of colorectal cancer cells
   117454233 (rack1)
  Exosomal proteins of bladder cancer cells
   117454233 (rack1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st NBCH_WD40 TRM82_WD Beta-prop_EML Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_VPS8 DSE1_N ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_TEP1_C ASA1 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_WDR41 CFAP251_N Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_WDR19_1st eIF2A Beta-prop_ACSF4 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Beta-prop_pof12 Cytochrom_D1 WD_LRWD1 Beta-prop_Vps41 Tricorn_2nd WDR54
Other DBs
NCBI-GeneID: 117454233
NCBI-ProteinID: XP_033949284
LinkDB
Position
10:23521108..23525085
AA seq 317 aa
MTEQMTVRGTLKGHSGWVTQIATTPQYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLL
GHSHFVSDVVISSDGQFALSGAWDGSLRLWDLTNGNTTRQFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDEGHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGFLNTVTVSPDGSLCASGGRDGQAMLWDLNEGKHLYTLDSGDTINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTCLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacagtgaggggtacccttaaggggcacagtggatgggtcacccag
attgccacgacgccccagtatcccgacatgattctgtcggcgtcccgagacaagtccatc
atcatgtggaagctgacccgtgatgaaaccaactatggcatcccccagcgctccttgttg
ggccactctcactttgtaagtgatgtggtcatctcctcagatggacagtttgccctgtcc
ggtgcctgggatggcagcctccgcctgtgggatctgaccaacggcaacaccacccgccaa
tttgttggacacaccaaggatgtgttgagcgtggccttttctgcggataaccgtcagatt
gtgtctggctcccgggacaagaccatcaagctgtggaacactcttggagtgtgcaagtac
accatccaggatgagggccactctgagtgggtgtcatgcgtgcgcttctcccccaacagc
agcaaccccatcattgtctcctgcggctgggacaagatggtcaaggtatggaacctggcc
aactgcaagctgaagaccaaccacatcggccacactggcttcctgaacacagtgactgtg
tctcctgatggctccctgtgcgcatccggtggaagggacggccaagccatgctctgggac
ctgaatgagggcaagcacctctacaccctggacagcggagacaccatcaacgccctctgc
ttcagccccaaccgttactggctgtgtgccgccactggccccagtatcaagatctgggat
ctggagggcaagatcattgtggatgagctgagacaggaagtgatcagcaccaacagcaag
gctgaacccccacagtgtacttgcctggcatggtctgctgatggacagaccctgtttgct
ggttacaccgacaacctgatcagagtgtggcaggtcacaattggaactcgataa

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