Pseudochaenichthys georgianus (South Georgia icefish): 117454279
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Entry
117454279 CDS
T09629
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117454279 (pcdh19)
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Protocadherins
117454279 (pcdh19)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
PepSY
Motif
Other DBs
NCBI-GeneID:
117454279
NCBI-ProteinID:
XP_033949343
EnsemblRapid:
ENSPGEG00000017008
LinkDB
All DBs
Position
10:complement(14470769..14529092)
Genome browser
AA seq
1096 aa
AA seq
DB search
MQTKEMELIQFIALWLLFWVGAEAVINLKYGINEEMKPGSVIGNVTKDALKQGFQIALQP
PYLRVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCIISLEVMSNSMEICVIKVEI
EDLNDNAPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYSYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
ESVYTVNVMENSPINTLVIDLNATDPDEGPNGEVVYTFNSYVTEKTRDAFKIDSRTGIIT
VNGILDYETSQIFEIDIQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISLLSLNTEMVEVS
ENAQRGYVIALVRVSDKDSGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQKDTY
NLTIQAEDSGSPPLRATKSLVVKVSDENDNPPHFIKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLTYTISEGDRAFFEIDQVNGEVRSTRMFGENAKPNYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQEPIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGNQKKSSKKKKLNKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQGHQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKRPPCSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNM
TVPPNVCQMPDQDPSEGFHCQDECRILGHSDRCWMPRVPARVKSPEHGRNVIALSIEATT
VDVPHYEDGTIKRTFATFGKDGPEDVERGELKGKRTQESQVCSPKANGGAVREAGNGREA
SSPITSPVHLKSPLSKPSSAYNTLKCRDAERIANHSLLRQPEGKDSEPAVREINTLLHDG
RDKESPSSKRLKDIVL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaaggagatggaattaatacaattcattgctttgtggctcttattttgggtc
ggggctgaagctgttatcaacctaaagtatggaataaacgaagagatgaagcccgggtca
gtaattggaaacgtgacaaaggacgcactaaagcaaggatttcagatcgcactgcagccc
ccgtacttgagggttatttcaaattcagaaccacgatgggtggaactcagtccagccgga
atccttacaacccaaatgaaaatagatcgagacgtagtttgtcgacagaacccaaagtgc
attatttccctagaagtgatgtcaaactctatggagatctgtgtcatcaaagtagaaatt
gaggatttaaacgataatgcacccagattcccaacgagtcacattgacattgaaatttct
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgacccggactcgggg
atcttcggagttcaatcatattccatcaccccgaatgagcttttcggactagaaatcaag
accagaggggacggctccaaaattgctgagcttgttgtgcaaaaatcgttagacagggag
acccagtcccactattcatatgaaataagtgcagaagatggaggagaccctcctaaaata
ggcgcggtccagttaaatatcaaggtgattgattctaatgacaacaaccctgtatttgac
gagtccgtgtatactgtaaatgtgatggagaattcccctatcaatacattagtcatagat
ttgaatgcaacggatcccgacgagggtcctaatggagaggttgtgtacacgtttaacagt
tacgtcaccgaaaaaacgagggatgcgtttaaaattgactccagaaccggaatcatcaca
gtcaacggtattttggattatgaaacaagccaaatattcgagattgacatccaggccaaa
gatttaggtcccaactctatcccagctcactgcaaagtcacagtaaacgtgatggacacg
aatgataacccacctgtcatcagtttactctcactgaacacagagatggtggaagttagt
gaaaacgcgcagcgtggatatgtaattgcgctggtgagggtgtcagataaggattcaggg
gcaaacggcaaagtgcagtgcaggctacagggcaacgttccgttcagacttcaagaatat
gagagcttctccactatacttgttgacggcaggctggacagagagcaaaaggacacatac
aacctgactatccaagcggaggacagtggctcgcctcctttacgcgccacaaaatctttg
gttgtgaaagtctcagatgaaaatgacaaccctccccacttcattaaaccacattatcaa
gagatggtgatggaaaacaacctcccgggttcgtgcctgcttgcagtatcagctgaagac
ccggatttgggcatgaatggcaccgtttcctactccatagtccccggtgagattaagcac
atggatgtaaacacatatgttagcataaacccatcaggccgcatttactccatgagatca
ttcgaccatgaatacacaaggacttttgatttcaaagtgttagccagagacaatggtaat
ccctccttatcaagtaacgccacggtgcgtattgttgtattagatgtcaacgacaataca
cctgttatgacaaaccctcccctagtaaatggcacagcggaggtttccatcccaagaaat
gctggggtgggttacatggtgacacaagtgaaagcagacgactacgatgagggggagaac
ggtcggctgacctataccatctcagagggggacagggctttctttgaaatcgaccaggtg
aacggagaggtgcgctccaccaggatgtttggagaaaacgccaagcccaactacgagatc
acagtggtggcgagggaccacggcaagccctccctgtctgcctcggcctacatcgtggtg
tacctctctccagacctgaacgcacaggagcctattggaccagtcaacctgtccctcatc
ttcatcatcgccctgggctctatcgccgccatcctgtttgtcaccatgatttttgtcgcg
gtcaagtgcaagagggacaacaaggagatccggacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcttatggcaaccagaagaagtccagcaagaagaagaagctg
aacaagaacgacatccgcctggtgccacgtgacgtcgaggaaacggacaaaatgaatgtg
gtgagttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcctg
ccgctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcagctcccaaccatggctatcagcacccgttcactgggcagggtcaccagcagcca
gacctcatcatcaacggcatgccactgccagagacggagaattattccatcgactccagt
tacgtgaacagcagagcccacctcattaaaaggcccccatgtagcacgtcgacattcaaa
gacctggaggggaacagtctgaaggacagcggccacgaggagagcgaccagaccgacagt
gaacatgatgtccagagaggacactacgttgacacggctgtcaatgacgtgctgaacatg
actgtcccccccaatgtttgccagatgccagaccaagatcccagcgaaggcttccactgc
caggacgaatgtcgcatccttggccactcggatcgctgctggatgccccgtgtcccggcg
cgtgtcaagtcaccggagcacggccgtaatgtcatcgctttgtctatcgaagccaccaca
gtggatgtgccccactacgaggacggcaccatcaagaggacttttgccaccttcggcaag
gatgggcctgaggacgtggaaaggggagagttaaagggaaagcggactcaggagtctcag
gtgtgcagccccaaggccaatggaggggctgttcgtgaagctggcaacgggcgtgaggca
tccagccccatcacttcccctgtgcacctgaagagcccattgtccaagccgtcatctgcc
tacaacacgctgaaatgccgcgacgcagagcgaatcgccaaccacagcctgctgcggcag
ccggaggggaaggacagtgagccagctgtcagggagatcaacacgcttctccacgatggc
cgagacaaggagtcccccagcagcaagcgcctgaaggacattgtgctttag
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integrated database retrieval system
