Pseudochaenichthys georgianus (South Georgia icefish): 117454291
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Entry
117454291 CDS
T09629
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117454291 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117454291 (atrx)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117454291 (atrx)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117454291 (atrx)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117454291 (atrx)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117454291
NCBI-ProteinID:
XP_033949361
LinkDB
All DBs
Position
10:24323376..24363326
Genome browser
AA seq
2132 aa
AA seq
DB search
MSLASSESHQDQMSEKAEEPGSSTETMKPSSSRNRRKSTSVAKNTGKGSDSSAESENEGA
TSDNPSDTNTSSASKGTLVMRPSGNENKGAMKLRVDFKQKPTDDTLQKKINCTACGKQVI
QLQRNAVYEHPALKVLICKSCYNYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNAF
CKKCILRNLGRKELSVITDENSKWHCYVCRSEPLQDLVSKCHSVLEKQELQSKQRKPDKS
EEREKKRHKNKEVKEHKPVVNGKEHSEGSGSMTFSYKKLQVPKEFLKKTKKLVETTTGLN
NTFIQFIQQAANEQEDKSIRYRHLKAFKAVLADLKKAHSALEEALGPELKNMELQNGNEG
QLIEREHSKVAASVENNHVDNVADATEGADVMEDADVEAEATEDAEVAETAEDADVEAED
ADVAEDAEDADVEAEDADVEATQDAEVAETADIAEDADVEAGDDNVVEDANVVAEEADVA
MDADLADESDEADDPGVADEEEADVAAEEADLKQHNEKAIAMDMDQVSTETELKDSQTET
DLTKKKIKTEVCDEGLVTAGEMSLDHDIMSVPPSVPEELFQMVESLADSTMLSQTGSDMV
TDAKLNKNSTTKSPQPKVKNLIVKLTPVPVVTTRGFTPSWSKNKEKDGQLQKKSKKESDK
EKGDAPSAVDGTESPPPSRRSSRLKTTPLRKQTDKRGKEESSDSELEEDRKGKTKSSKTS
RNAKKEDGEETKDSEKSPVDSDSDEVPNVLLEKAAAGRSTDEEQGSTSAKKCLFKLNNTS
TEDTDKASKRKRKSASSDSDSGNKSKKTSKKKKKQKGSDNADSDSEKEKETKSKVALGKR
RSSRVKKQDEAKEGKGSTEKKATKLKRSYEKKRRGGSPKASAKLQSSSSEDDDEEEEEKA
DGDDSDAQKIKPIVEDNVVGGSGAFRQSSGDEDDDKEKVSQVFEDDDDDDPENRIAKKML
LAQIKSNYSSGAESSSDDEDDKEAKSSKKAKKEDDDDEDDDDEEEQGDEDTGDSEDSDIE
VKKRGGRHKLLRHKLSLSEGESGEEKAGSKEKKKGKKNKEKVSSDDSSDSDFEDSESSEQ
SGVSEELSESENDGKRRKTRSSKKKEEAKQRSYKQQKKKRRRIKVQESSSSNEKSGDEDA
EDRKGRKKLRKILKNDKLRSETRDALKEEEDRRKRIAEREALREKLREVLPPQIQQDISK
VIVAEESSLMACPITTKLVLDEDEETKEPIVQVHRQLVTKLKPHQVDGVQFMWDCCCESV
KKIEKSSGSGCILAHCMGLGKTLQVVTLLHTLLLCEKLDFSTALVVAPLNTVLNWLNEFE
KWQVGMKDEESLEVIELATVKRPQDRAYALQRWQDMGGVMIIGYEMYRNLTQGRNIKSKK
LKETFQKTLVDPGPDMVICDEGHILKNEASAVSKAMNSIRTRRRVVLTGTPLQNNLVEYH
CMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLQDVRIMKKRAHILYEMLNGCVQRKD
YTALTKFLPPKHEYVLSVRVTPIQCKLYRYYLENFTGVGNAVEGGRGRAGTKLFSDFQML
SRIWTHPWCLQLDYISKENRGFFDEDSMEEFIASETEEESSMSMTSEDEKAKKKKKRGKG
KKKGSEDSDSDEVEVIKEWNTSTRGKNGEGRVRPEPVEEPRHASSPDWHKEFVTEADAEI
LEHSGKLTLLFEILRMAEEVDEKVLVFSQSLISLDLIEDFLELSCRAKDENKVSPYKGEG
KWFRNIDYYRLDGSTNALTRKKWAEEFNDVNNPRGRLFLISTRAGSLGINLVGANRVIIF
DASWNPSYDVQSIFRVYRFGQIRTVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQI
ERHFTTNELTELYIFDPDMLEESSEKKSKRATPLLPKDPFLAEMLQNNKDQIMCYHEHDS
LLEHKGEEALSEEDRKAAWAEYEAEKKGVFVKSNYQVGYPQMDMGASNYFSFNMAALASM
SNQQLEDLINQGRQKVIEATNSLKSIIREPLEDLIGRVWKENPSFNEAQVQSMALGRQST
VELEFKHREAVYRDVLTRQQTLMMYVQKLITNRKVQEQQLAMQNQANYLQQLAMQNGMMG
GAGLSQMDLVGLYQQLHGLGGMGKNPGPSKGL
NT seq
6399 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcatcttctgaatcacatcaagaccaaatgtcagaaaaagcagaggagcct
ggcagctcaacagaaactatgaagccttcctcttctcgcaacaggaggaagtccacttct
gtggctaagaacactggaaaaggatccgactcgtcagccgagagtgaaaatgaaggtgca
acttctgacaatccttcagacactaacacaagcagcgcttctaaaggcactttagtgatg
agaccatctgggaatgaaaataaaggcgccatgaagctgagagtggatttcaaacagaaa
ccaacagatgatactttgcagaagaagataaactgcactgcctgtggaaaacaagtaata
cagttgcagcgtaacgcggtgtacgagcatcccgcgctcaaagtactaatttgcaagtca
tgctacaattattacaccagtgatgacattaacagagactccgatgggatggatgagcag
tgcaggtggtgtgctgaaggtggcaagctcatctgctgtgactactgcaacaacgctttc
tgcaagaagtgcatcctgcgcaacctgggcaggaaggagctgtctgtcattactgatgag
aactcaaagtggcactgctatgtctgcaggtcagagcccctccaggatttggtctccaaa
tgccacagtgtccttgaaaaacaagaacttcaatccaagcaacgaaaaccagacaaaagc
gaggaacgtgagaaaaagagacacaagaataaagaagtcaaggagcacaagccggttgtc
aatgggaaagaacacagcgaaggctcagggtccatgactttctcctacaaaaaactgcag
gtacccaaagaatttttaaagaaaacaaaaaagcttgttgagactacaacaggtctgaac
aatacgttcatccagttcatccagcaggcagccaacgagcaggaagataagtctatcaga
taccggcatttgaaagccttcaaggccgtgcttgctgatttaaaaaaagctcacagtgct
ttggaggaggctttggggcctgaattaaaaaacatggagttgcagaatggtaacgaaggg
cagcttattgaaagagagcactctaaagtcgctgcttctgtagaaaacaaccatgtggat
aatgtggcagacgcaacagagggtgctgacgtaatggaggatgctgacgtagaggcagaa
gcaacggaggatgctgaagtagcggagaccgctgaggacgctgatgtagaggcagaggat
gctgacgtagcggaggatgctgaggacgctgatgtagaggcagaggatgctgacgtagag
gcaacacaggatgctgaagtagcggagaccgctgacatagctgaggacgctgacgtagag
gcgggggatgataacgtagtggaggatgctaacgtagttgcagaggaagctgacgtcgcg
atggatgctgacttggcagatgaatctgacgaagcagatgaccctggcgttgcggatgag
gaagaggctgacgtagccgcagaagaagcagacctgaagcagcataatgagaaagccata
gccatggacatggatcaagtgtcaactgagactgaacttaaagacagccaaacagaaact
gatctcaccaaaaagaaaattaaaactgaagtatgtgatgaagggctggtgacagcaggt
gaaatgtccctcgatcatgacatcatgtctgtacctccatctgttcctgaggagcttttt
cagatggtggagagtcttgcggattctaccatgctctcccagaccggctctgatatggtc
acagacgcaaagttaaataagaactcaacaactaaatccccccagcccaaggtgaagaac
ctcatagtcaaactgacccctgtgcctgtcgtgacgacacgtgggttcacgccctcctgg
tccaaaaacaaagaaaaggatggacagctgcaaaaaaaatccaaaaaagaaagtgacaag
gagaaaggcgatgcccctagtgctgtagacgggacagaaagcccaccaccaagccgtcgc
tccagtaggttgaagaccactccattgaggaagcagactgataaaaggggtaaggaagag
tcctctgattcagagttggaggaagatcgtaagggcaaaaccaagtcctccaagacatca
agaaacgccaagaaagaggatggggaggagaccaaggattcagagaaaagtccagtggat
tctgactcagacgaagttccaaacgtactgttggagaaagcagcagctggccgcagcact
gatgaggaacagggaagcacaagtgctaaaaagtgtttattcaaactaaacaacacatct
acagaagacacagacaaagcatccaaacgcaaaaggaaatctgcaagctccgattcagac
tctggaaacaaaagtaaaaagacgtccaagaagaagaagaaacaaaaaggctcagataac
gccgactctgactctgaaaaagagaaggagacgaagagtaaagtggccttagggaagagg
agatctagccgtgtgaagaaacaagacgaagcaaaagaaggaaaaggatcaacagagaag
aaagcaactaagctgaagaggtcttatgaaaagaagcgcaggggagggagtccaaaagca
tccgccaagcttcagtcatcgtccagtgaagatgatgatgaggaggaggaggagaaggct
gatggagatgacagtgatgcacagaagatcaaacccatcgtggaggataacgtggtggga
ggcagtggagctttccgacaatcctcaggtgacgaagatgacgataaagagaaggtctct
caggttttcgaagatgacgatgatgatgatcctgaaaacaggattgcaaagaaaatgctt
cttgcccaaataaagtcaaactattcttctggagcggagagctcctctgatgatgaagac
gataaggaagcaaagtcctcgaagaaagctaaaaaagaggatgatgatgatgaggatgat
gatgatgaagaggagcagggagacgaggacacaggcgactctgaggattctgatattgaa
gtgaagaagcgtggcggacgacacaaattgcttcgtcacaaactctcgctgagtgaggga
gaatcaggagaggagaaagctggcagtaaagagaagaaaaagggcaaaaagaacaaggag
aaagtgagcagcgatgactcttcggactcggactttgaggactcagagtcaagtgaacag
tcgggggtgagcgaggagctcagtgaatcggagaatgacggaaaacgcagaaagaccaga
tcttcaaagaagaaggaagaggcgaaacagagaagttacaagcagcagaagaagaagcga
cgcaggatcaaagttcaggaatcctcttccagcaatgagaagagtggagatgaagacgcc
gaagaccgcaaaggacgcaaaaagctccgcaaaatcctgaagaatgacaaactgcggtca
gagaccagagatgctctgaaagaagaggaggataggaggaagcgtatagctgagagagaa
gcactcagggagaaacttcgagaggtgcttcccccgcagattcagcaggacatttccaaa
gtgattgtggcggaggagtcttccctgatggcctgtcccatcaccaccaagctggtgctg
gatgaggatgaggagaccaaggagccgattgtgcaggtgcacaggcaacttgtcacaaaa
ctcaaacctcatcaggttgacggggtgcagttcatgtgggactgttgctgtgaatctgtg
aagaagatcgagaagtcttctggctccggctgcatcctcgcccactgtatgggtctgggg
aaaactctgcaggtggtgacattacttcacactttgctgctgtgtgagaagctcgatttc
tccacagccctggtggttgctcccctgaacactgtcctcaattggctcaatgagtttgag
aagtggcaagtgggaatgaaggatgaggagagtttagaggtgattgagctggccacagtg
aagaggccacaggaccgagcatacgcccttcagcgatggcaggatatgggtggcgttatg
atcattggatatgaaatgtatcgaaacctgacgcagggcaggaacatcaagagcaagaag
ctcaaagagacctttcagaagactctggtagacccaggtccagacatggtgatttgtgat
gaaggtcacatcctgaagaatgaggcgtctgctgtgtccaaagcgatgaactccatccgg
acgagaaggagggtggtgctgacgggaacgcctctgcagaacaacctcgttgaataccac
tgcatggtgaacttcatcaaggagaacctgcttggttcagtgaaagagttcaggaaccgc
ttcattaaccccatccagaacggtcagtgtgccgactccacactacaagatgtccggatc
atgaagaagagggctcacatcctctatgagatgctgaacggctgtgtccagaggaaagat
tacacggcactcaccaagttcctcccacccaaacacgagtatgtgctgtcggtccgagtg
actccgatccagtgtaaactctacagatactacctggagaacttcacaggtgtagggaat
gctgtggaggggggccggggccgcgccgggaccaaactcttcagtgatttccagatgctc
agcagaatctggacccatccctggtgccttcagctggactacatcagtaaagaaaacagg
ggtttctttgacgaggacagtatggaggagttcatcgcttctgagacggaagaagagtcc
tccatgagtatgacctccgaggatgaaaaggcaaaaaagaaaaagaagcgaggcaaggga
aagaagaaaggctctgaggactcggacagtgacgaggtggaggtcatcaaggagtggaac
accagcaccaggggcaagaacggagaaggtcgagtccgaccagaacctgtagaagaacct
cggcacgccagctctcctgactggcacaaggagtttgtcactgaggctgacgctgagatc
ctggagcactctggaaagctgacgctactctttgagatcctgcgcatggcagaggaagtt
gacgagaaagtgttggtgttcagtcagtctctcatctctctggacctgattgaggatttc
ctggagctgtcttgcagagctaaagacgaaaataaggtttctccatacaaaggtgaaggc
aagtggttcaggaacatcgactactatcgcctggatggctccaccaacgccttgaccagg
aagaagtgggctgaagagtttaatgacgtcaataacccaaggggtcgtttgttcctaatt
tcaacgcgagccggctctctcggcatcaacctggtgggagccaacagggtcatcatcttc
gacgcctcctggaacccctcctacgacgtccagagtatcttcagggtttaccgctttggc
cagattaggaccgtctatgtgtacaggttcctggcgcagggtacaatggaggacaagatt
tacgaccggcaggtaaccaaacagtctctgtcgttccgggtggtggaccagcaacagatc
gagaggcacttcacaaccaacgagctgacggagctctacatcttcgacccggacatgctg
gaagaatcctcggagaagaagagcaagagagccacgcccttgcttcctaaggatcccttc
ctggctgagatgctgcagaataacaaggaccagatcatgtgttaccatgaacacgactcc
ctgctggagcacaagggggaggaagccctgagcgaggaggatcgcaaggctgcctgggcc
gagtacgaggcagagaaaaagggtgttttcgtgaagtccaactaccaggtgggataccct
cagatggacatgggcgcctccaactacttctccttcaacatggcggctttggcctccatg
tccaaccagcagctggaggacctgataaaccagggacgccagaaagtcatcgaagcaaca
aattcattgaagtctatcatacgggagccgctggaagacctcatcggcagagtgtggaag
gagaacccctccttcaatgaagctcaggtgcagtccatggctctgggccggcagtccacc
gtagagctggagtttaaacaccgagaggccgtgtaccgggacgtcctgaccaggcagcag
acgctgatgatgtacgttcagaagctgatcaccaacaggaaggtgcaggagcagcagctg
gccatgcagaaccaggccaactacctgcagcagctggccatgcagaacggcatgatggga
ggcgctgggctcagccagatggacctggtgggtctctaccagcagctccacggcctgggg
ggcatgggcaagaacccaggtccctccaagggcctgtag
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integrated database retrieval system
