KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117454335
Entry
117454335         CDS       T09629                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03015  mRNA surveillance pathway
pgeo04261  Adrenergic signaling in cardiomyocytes
pgeo04382  Cornified envelope formation
pgeo04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117454335
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117454335
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    117454335
  09158 Development and regeneration
   04382 Cornified envelope formation
    117454335
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pgeo01009]
    117454335
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgeo03019]
    117454335
   03036 Chromosome and associated proteins [BR:pgeo03036]
    117454335
Protein phosphatases and associated proteins [BR:pgeo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     117454335
Messenger RNA biogenesis [BR:pgeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     117454335
Chromosome and associated proteins [BR:pgeo03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     117454335
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Y_phosphatase2
Other DBs
NCBI-GeneID: 117454335
NCBI-ProteinID: XP_033949415
LinkDB
Position
10:20130645..20154126
AA seq 470 aa
MGEDTDAPPTLNHRGFLPDHNYVTEGKTRREKAASAGCNKVCVPPSDIISTVEFNHTGEL
LATGDKGGRVVIFQREPESKCEPFSQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL
PQQNAAHFLLSTNDKTIKLWKVSERDKRPEGYNLKDEEGRIKDLSTVTSLQVPVLMPMDL
MVEVSPRRVFANAHTYHVNSISVNSDYQTYMSADDLRINLWHLDITDRSFNIVDIKPANM
EDLTEVITAAEFHPHHCNLFVYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSARSFFS
EIISSVSDVKFSHSGRYLLTRDYLTAKVWDLNMESKPLETYQVHDYLRSKLCSLYENDCI
FDKFECAWNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCAAGG
KRRKDDISVDSLDFTKKILHTAWHPTENIIAIAATNNLYIFQDKLNSELH
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgggcgaagacactgacgcccccccgacgctcaaccaccgcggcttcctccccgaccac
aactatgtgactgaaggtaagaccaggagggagaaagctgcatctgctggatgtaacaaa
gtgtgtgtgcccccatctgatatcatctccactgttgagttcaaccacactggagagctc
ctggccacaggggacaaaggaggccgagtggtcatctttcagagggaacctgagagcaag
tgtgagccattctcccagggagagtacaatgtctacagcaccttccagagccatgagccc
gagttcgactaccttaagagtctggagatcgaggagaaaatcaataagatccgatggctg
cctcagcaaaacgccgcacacttcctcctctccaccaacgataagaccattaagttgtgg
aaggtcagtgaaagagataaaaggccagagggatacaacctgaaggatgaggagggtcgc
atcaaggacctctccaccgtcacctccctacaggtgccggtgttgatgccgatggacctg
atggtggaggtgagtccgcggcgagtgtttgccaacgcccacacctaccacgtcaactcc
atctccgtcaactccgactatcagacctacatgtcagctgacgacctgaggatcaacctc
tggcatctggacatcaccgaccgcagcttcaacattgtggacatcaagccagccaacatg
gaggacctgacggaggtgatcacagcggctgagtttcacccccaccactgtaacctgttt
gtctacagcagcagcaaaggcaccttgcgcctctgtgacatgagagaggcagcgttgtgc
gacaaacactccaaattgttcgaggagcccgaggaccccagcgcccgctctttcttctcc
gagatcatctcctccgtgtcggacgtgaagttcagccacagcggtcgctacctgctcacc
agagactacctgactgccaaagtctgggacctcaacatggagagcaagcccctggagaca
taccaggttcacgattacctccgcagcaagttgtgttctctgtacgaaaacgactgcatc
tttgacaagtttgagtgtgcctggaacggctcggacagtgtgatcatgaccggagcctac
aacaacttcttccgcatgttcgaccgcaacaccaaacgggacgtaaccctggaggcgtcg
agggagagcagcaaaccccgagctgtcctgaagccacggagggtctgcgcggcggggggg
aagcggcggaaggacgacatcagcgtggacagcctggacttcaccaagaagatcctccac
acggcctggcacccgactgagaacatcatcgccatcgctgccaccaacaacctgtatatc
ttccaggacaaactcaactctgagttacattaa

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