Pseudochaenichthys georgianus (South Georgia icefish): 117454428
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Entry
117454428 CDS
T09629
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117454428 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117454428 (cstf2)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117454428 (cstf2)
U7-dependent histone pre-mRNA processing factors
117454428 (cstf2)
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GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
117454428
NCBI-ProteinID:
XP_033949547
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All DBs
Position
10:15304749..15317671
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AA seq
509 aa
AA seq
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MATLAAAAAAAAAAAAIAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFR
LVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKIIAG
LGTGAPIIESPYGDTIQPQEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLL
QNPQLAYALLQAQVVMRIVDPEIALKMLHRQTPVQPLIPSGQGGGAPPLNPPSAPPNMQV
PQPQQPVPGMHVNGAPQMMQPPNMGVVPGQMPGPGPGPGPGPGPAQGPGAVGPPGPGGIP
PRGLLGDGPNDPRGGTLLSVTGEVIEPGRPYMAAPPPHQAPPVHMAGAPPVHMAGGPPPD
MRGPPMDMRGPPMGEPRNMMGDPRGPPMMEQRGPPMETRGRDPRAMDTRGPVAAQRVPMA
TGMPGPAPHSMAPNAPPPARPGPGNSGPPSGGGFSPGQSQVSTQDQEKAALIMQVLQLTP
EQIAMLPPEQRQSILILKEQIQKTAGGGP
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgacattagctgctgctgctgcggctgcggctgctgcggctgctatcgccgctaat
agagacccagctgttgaccgttcattacgatcagtatttgtggggaacattccgtatgag
gctacagaggaacagctgaaagacatattttctgaagtgggacttgttgtcagcttcagg
ttggtatatgacagggagacaggaaagccaaagggatatggcttctgtgaataccaagac
caggagacggccctcagtgccatgcggaacctgaacgggagggagttcagtggtcgggct
ctgagggttgacaacgcagccagtgaaaaaaacaaggaagagctgaaaatcattgcaggt
ttgggaactggagccccaattatcgagtctccttatggagacaccatccagccacaggaa
gccccggagtccatcagcagagctgtggccagtctgccccccgaacagatgtttgaactt
atgaaacagatgaagctgtgtgtgcagaacagtccccaggaggcgaggaacatgctgctg
cagaaccctcagctggcctacgccttgctgcaggcccaagtggtgatgaggatcgttgac
cctgagatagccttgaaaatgctccatcgtcagacaccagtccagccgctcattcccagc
gggcaggggggtggagcgccgcccctcaaccccccctctgctccacccaacatgcaagtg
cctcagccgcagcagcctgtgcctggaatgcatgtcaacggagcccctcagatgatgcag
ccccccaacatgggtgttgttcctggccaaatgccaggacccggacccggacctggaccg
ggaccaggaccagctcaaggaccgggagcagtcggacctccaggacccggtggtatcccc
cccagagggctgctgggagatggtcctaatgaccccagaggaggaactctgctgtccgtc
actggcgaggtcatcgagcccggccggccttacatggcagcccccccaccccaccaagcc
ccacctgtacacatggcaggagccccacctgtacacatggcaggaggaccccccccggat
atgagaggccctccaatggacatgagaggcccacccatgggtgaaccacgcaacatgatg
ggcgaccccagaggtcccccgatgatggagcaacgcggacccccgatggaaaccagaggc
cgtgacccgagggcgatggacactcgaggtccggtggcggctcagagggttcccatggcg
acaggaatgccgggccccgctcctcatagcatggctccgaacgctcctccacctgcaaga
ccgggtcctggaaactctggtcctccgtcgggagggggcttcagtccaggccagagccag
gtctccacacaggaccaggagaaggctgccctcatcatgcaggtgctgcagctgacccca
gaacagatcgccatgctgcccccggagcagcggcagagcatcctgatcctcaaagagcag
attcagaagactgcagggggggggccttaa
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