Pseudochaenichthys georgianus (South Georgia icefish): 117454483
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Entry
117454483 CDS
T09629
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117454483
04082 Neuroactive ligand signaling
117454483
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117454483
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117454483
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
117454483
NCBI-ProteinID:
XP_033949637
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Position
10:complement(19245310..19261341)
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AA seq
490 aa
AA seq
DB search
MAAPVKAALALLVLTVATALCAEVEERLVSHLLSADRYNKLIRPAVNNSQQVTIYIQVSL
AQLINVNEREQIMTTNCWLSQVWHDYRLMWDPEEYQGIKKIRLPSQHIWLPDIVLYNNAD
GTYEVSFYSNAVVSNNGEVAWLPPAIYKSACKIEVRDFPFDQQNCTLKFRSWTYDHTEID
LILLSDFASRDDFKPSGEWDIVSLPGRKNEDPNDIRYLDITYDFIIKRKPLFYTINLIIP
CILITSLAILVFYLPSDCGEKMTLTISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFS
MVLVTFSIVTSVCVLNVHHRSPSTHTMPPWVKRVFLYRLPSYLFMRRPGSSNIREKFRRK
HQQRSYSDQKMCDGGHAGMADSSSSFFVNEESAKRYGWRISDMSDNTEFRKRMTLKSNID
VEDAVDGVRYIADKMKREDDDEGIIEDWKYVAMVIDRLFLWIFVFVCVVGTLGLFMQPLF
QNYYTPLVDE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccggtgaaagcagctttggctcttctggtgctcaccgtggcaactgccttg
tgtgcggaggtggaggagcgtctggtgagtcacctgttgtcagcagatcgctacaacaag
ctgatcagaccagctgtgaacaacagccagcaggtcaccatctacatccaggtgtctctg
gcccagctgatcaatgtgaacgagagggagcagatcatgaccaccaactgttggctcagt
caggtgtggcatgactacagattaatgtgggaccctgaagagtaccagggaatcaagaaa
atccgactcccgtcacaacacatctggctgccagacatcgtcctctacaacaatgctgat
gggacctatgaagtctccttctactccaatgcagtggtctccaacaacggcgaagtggcc
tggctcccaccagctatctacaagtcagcatgcaaaattgaagtccgtgatttccctttc
gaccagcagaactgcaccctcaagtttcgctcctggacctacgaccacactgagatagac
ctcatcctcctcagtgatttcgcctcacgagacgacttcaaacccagcggtgagtgggat
attgtttccctgcctggccgcaagaacgaagacccgaacgacatcaggtacctggacatc
acctatgactttattatcaaaagaaagcctctcttctacaccatcaacctgatcattccc
tgcatcctgatcacgtctctggctatcctggtgttctacctcccgtcagactgtggtgag
aagatgacgctcactatctccgtcctcctggcactcactgtgtttctactccttatctcc
aaaattgtgccacccacgtctttggcagtgcctctgatcggaaagtacctgatgttttct
atggtactggtcaccttctccatcgtcaccagcgtttgcgtgctcaacgtgcaccatcgg
tcccccagtacgcacaccatgcctccgtgggtgaagcgtgtcttcctgtaccggctcccc
tcttacctcttcatgcggagacccggcagctccaacatccgtgagaagttcaggagaaaa
caccaacagagatcctactctgaccagaagatgtgtgatggaggccatgcagggatggca
gattcctcctcatccttcttcgtcaacgaggagtcggccaaacgctacggctggagaatc
agcgacatgtcagacaacacagagttcaggaagaggatgacgctcaagagcaacattgac
gtggaagatgcagtagatggagtacgctacatcgctgacaagatgaagagagaggatgat
gatgaagggatcattgaagactggaagtacgtggccatggtgatcgaccgtctcttcctg
tggatcttcgtgtttgtgtgtgtggtcgggacgctgggtctcttcatgcagcctctgttc
cagaactactacactccccttgttgatgagtag
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