Pseudochaenichthys georgianus (South Georgia icefish): 117454726
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Entry
117454726 CDS
T09629
Symbol
cspg5b
Name
(RefSeq) chondroitin sulfate proteoglycan 5b isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pgeo00535
]
117454726 (cspg5b)
Proteoglycans [BR:
pgeo00535
]
Cell surface proteoglycans
Others
117454726 (cspg5b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
Cadherin_C_2
PIRT
EGF
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
117454726
NCBI-ProteinID:
XP_033949755
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Position
11:complement(21992504..22005487)
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AA seq
635 aa
AA seq
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MARSDSRLDTWQVLLTISMVIIPLSAHGRHSLSRHHHHHNQSSVNKEALNARMVLSDDSA
ERDHLIGLGAKLPLSSTKHHHSHKHAHLDVVDEDPPVGEELTAGGAGPDQPGNPMSDEVI
TVEFHSPAPEVVPADGALDWAKAPQPQKQKGGDPTAWTLSDFYDYLSPDNDPSALDATPE
PEPTPSPPPDMEDENPLLAGSPAVPDNVRPDVEPSIPAPSMPAPDTGDGLGLGGAMGADG
CRLGYVRSGPGVCVSQCDIDPNFCLNGGVCTVVAGMGAFCRCNVQEYIWNKGTRCDWAIT
EFQVMCVLVGVASVVLIFLFMIIVCFAKKLHRLKNENNRLRKRRCVTGSKYRPQSSEPQT
DGLSVSTMADGSQPNDDPQKQEDPAKSAQAKEEGSMNILNSHSPKHENNRPTSVAHDPGH
TPNNTEENAEDGVTIGLEVLLPKEAKLHSETGSPLQYDVFLYKVPNSEDSTSPIHAPPTQ
SGNSYSSSHPMPKSPKSPKTPKVHKSPKHSREHSHSSREALSGRHASPGRHPSPGHHPSP
SRHSAPSSCHPPSHHSPSRYTSFPPSSSSSSSTPPELRRPRGRSQALGSECSWTGREQGG
HLHPSPSSPHLTQPSPSPSRVKCSPVSTRSLPVLS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcagtgacagtcgtttggacacctggcaggtgcttctgaccatctccatggtc
atcatcccgctgtctgctcacgggaggcattctctgtcaaggcaccatcatcaccacaac
caatcatctgtcaacaaggaggccttgaacgcccggatggtgctcagtgatgactcagca
gagagggaccacctgatcgggctcggggctaaactcccactcagctccaccaaacatcac
cattctcataaacatgcccacctagacgttgttgatgaagacccgcctgtgggggaggag
ctgactgccggaggcgcggggccagaccagccgggaaaccccatgtctgatgaagtcatc
accgtggagtttcacagccctgcgcctgaggttgtgcccgctgacggtgctctggattgg
gccaaagcccctcaaccccagaagcaaaaaggaggggacccaactgcctggacgctttct
gacttttacgactacctgtcccctgacaacgacccctcagccctggatgccaccccagaa
cctgagcccaccccttcacccccgcctgacatggaagatgagaatccgctccttgctggt
tctcctgctgttcctgacaatgtgaggcctgacgtggagccctccataccagctccctcc
atgccagcgccagacacaggtgatgggttagggttagggggcgccatgggggctgacggc
tgcaggctgggctatgtgcgctctggacctggagtctgtgtgtctcagtgtgacattgat
cccaatttctgcctcaatggaggagtttgcaccgtggtggcaggcatgggagctttctgc
aggtgcaatgtgcaggagtacatctggaacaaaggcacacgctgtgattgggcgatcaca
gagttccaggtgatgtgcgtgctggtgggcgtggcttcagtggtactcatcttcctcttc
atgatcattgtgtgctttgccaagaagctgcaccgcctcaagaacgagaacaaccgcctt
cgcaaacgcaggtgtgtgactgggagtaaataccgcccacagagcagcgagccacagaca
gacggcctctccgtgtccaccatggccgacggctcgcagccaaacgatgaccctcagaag
caggaagacccagcgaagtccgcccaagccaaggaagagggttcaatgaacatcctcaac
tctcactcccccaaacacgagaacaaccgtccgacctctgtcgcccacgacccgggccac
acccctaacaacacagaggaaaatgcagaggatggagtcacaattggcctggaggtgctc
ctccccaaagaggccaagctccactcagagaccggctcgccccttcaatatgacgtcttc
ctctacaaggttcccaacagtgaagactccacctctcccatccacgcccctcccacacag
agcggcaactcatactcctcctctcaccccatgcccaaatcgcccaaatcgcccaaaaca
cccaaggtgcataaatcacccaaacacagcagggagcactcacacagcagccgcgaagcc
ttgtctgggaggcacgcctcacctggacgccacccctcacccggccaccacccctcaccc
agccgtcattctgctccaagttcctgccacccaccctcccatcactccccctcccggtac
acaagcttccccccctcctcctcctcctcctcctccaccccgcctgagttacgcaggccc
agaggtcggtctcaggccctgggctctgagtgctcttggacagggagagagcagggtgga
cacctccatccttccccctcctccccccacctcacccagccttctccatccccatccaga
gtgaagtgcagcccggtcagcaccagatctctgcctgttctgtcctga
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