Pseudochaenichthys georgianus (South Georgia icefish): 117454759
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Entry
117454759 CDS
T09629
Symbol
khdrbs1b
Name
(RefSeq) LOW QUALITY PROTEIN: KH domain-containing, RNA-binding, signal transduction-associated protein 1b
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117454759 (khdrbs1b)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117454759 (khdrbs1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Qua1
Sam68-YY
KH-I_KHDC4-BBP
KH_1
STAR_dimer
KH_5
Motif
Other DBs
NCBI-GeneID:
117454759
NCBI-ProteinID:
XP_033949816
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All DBs
Position
11:complement(30718481..30745316)
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AA seq
362 aa
AA seq
DB search
MENDEKYLPELLAEKDSLDSSFTHAMKLLNAEIDRLQKDETKKEADDYMDLFTTKNIKLK
ERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKSKEEGLRKAGE
PKYSHLSLELHVFVEVFAPVPEAYLRMAHAMEEVKKFLFPDMMDDICQEQFLEMGYLNGG
QDHGARGRGGPPVRGRGLPPGGAHRGRGMPPRGAPARGGVPRGGPPRGGAVRGVPSGRGG
PPAAPSRGAPAPRARPPAAGPPHRMAHPPPHQHTPTAASEGYEEYGYDESYTDTAYESYD
SYYSQPQAEPEYYDYGHGETTESYESYGQDDWNGTQRAPTGKAPPPSRGAKTPYREHPYR
QY
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgacgagaaatatctccccgagctgctggcggagaaggacagcctggactcg
tcttttacgcacgctatgaaacttttaaacgcagaaattgataggctccagaaagacgag
actaaaaaggaggcggacgactacatggaccttttcacaacaaagaacatcaaacttaag
gaacgagtgctcatacctgtcaaacagtacccgaagttcaacttcgtggggaagattctg
ggacctcagggcaacacgatcaaacgtctgcaggaagagaccggggccaagatctcggtg
ctgggcaaaggatccatgagagacaaatccaaggaggaggggctgaggaaagccggcgag
cccaaatactcccacctgtccttggagctgcacgtgttcgtcgaggtgttcgcccccgtg
cccgaggcctacctgcgcatggcccacgccatggaggaggtcaagaagttcctgtttccg
gatatgatggatgatatctgccaagagcagttcctggagatgggctacctgaacggaggc
caggatcacggggccagaggcagagggggccctccggtcaggggccgcggactcccccct
ggtggagcacacaggggtcgggggatgccccctcgtggagctcctgccaggggaggagta
cctcgaggcggcccacccagaggtggagcagtgaggggggtcccatcggggcgaggagga
cccccagcagcaccctccagaggagcaccagcaccccgagccagacccccagctgcagga
cccccccacaggatggcacacccacccccccaccagcacacccccactgcagcctctgag
ggctacgaggaatatggctacgatgagagctacacagacacggcctacgagtcatacgac
agctactacagtcagccgcaggcagagccagagtattatgactacggacacggagagacc
acagagtcgtacgagtcgtatggccaggatgactggaacgggacccagcgagcacccaca
gggaaggccccccccccctccagaggtgccaagacgccttaccgggagcacccgtaccga
cagtactga
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