Pseudochaenichthys georgianus (South Georgia icefish): 117454790
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Entry
117454790 CDS
T09629
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117454790
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117454790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
Ig_2
ig
LRRNT
V-set
LRR_LRWD1
LRR_EndoS
DUF1564
LRR_9
Motif
Other DBs
NCBI-GeneID:
117454790
NCBI-ProteinID:
XP_033949870
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All DBs
Position
11:complement(18117550..18122334)
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AA seq
608 aa
AA seq
DB search
MFEGIAVHQWLCCGALFQLAAGVAFFSETRRSCPQPCRCNTVLQEVNCSDGQLTTVPNIL
PQNTKILNLTHNKIKSLVQQQFQTLTQLLDLDLNDNIMVLIEVEAFIGLQSLITLRLARN
HLKIIHVGAFDGLPKLKLLDISRNEILVFLDLTFRDLTALQFIIAADNDVVFISRRAFTG
LPSLQELHLDGCNLTAVPTEALTQLGELRSLHFHRLGLTTLPNYAFRQLEHLKELVISQC
CLENLSGNSLFGLNLTSLTIRNCNLSAVPYTPLHHLVYLVFLDLSFNPITFIYGNLFGEL
LRLQELHLVGGSLLHIDIGAFRGLAHFRLLNVSRNLLTTLEVGAFHSVDTLRNLGLDNNP
LACDCRLLWVVRRQPYLEFGGNPPTCRTSVQLQGWYFLDFTEAELPGLLTCRQPRILNRK
PQKVRVDQGHTVVFECNAEGDPVPSVTWISPQLKPLSPIGRIRALSNGSLEVRYAQPMDS
GAYFCVASNAAGNDSMPVSLHVRAFPASSKKNLRLKGWFAFPSASPGVSGDQNISFDVKT
LLVAATIGFLSFFSSVSVCFIFMLLWSKSKGQIKNTATIAYVPRSAESSNNGGKGNYMET
SRFTMKLI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggggattgccgtccaccaatggctgtgctgtggagctctcttccagttggca
gcgggggtggccttcttctctgaaacccgccggtcgtgtccacagccctgccgctgcaac
accgtgctgcaggaggtcaactgctccgatggacaactcactacagtgcccaacattctc
ccgcagaacactaaaatactaaacttgacacataataagatcaagtctctggtgcagcag
cagttccagactttgacacaacttttagacttagatttgaatgacaatatcatggtttta
attgaggtggaagcatttatcggcttgcaaagtctaataactctgcgtcttgctcgcaac
cacctaaagattatccatgtgggggcgtttgatggtttgccaaaactaaagttactggac
ataagcagaaatgagatccttgtttttctcgatttgactttccgtgacttaactgccctt
caatttattatagcagcagataatgacgtagtttttatttctcgtagagctttcactggc
ttacccagtttgcaagagctgcatctcgatggctgcaacctcactgccgtgccgacagag
gcgctcactcagcttggcgagctgaggagtcttcattttcacagattgggcctcacaacg
ctgccaaactacgctttccgtcagctagagcatctcaaggaacttgtcatttctcaatgc
tgtctggagaatctgtcaggaaacagtctttttggactaaatcttacatccctgactatt
agaaactgcaacctcagtgctgtcccctacacccctttgcatcatcttgtatatcttgta
ttcttagacctttcttttaacccaattacattcatttatgggaacctttttggagagttg
ctccggctccaggaactccatttggtggggggatcattgctgcatatcgatattggagca
ttcagaggtttggctcatttcagacttctgaatgtatccagaaaccttctaaccacactt
gaggtgggagccttccattcagtggacaccctgagaaatctgggactagacaacaaccca
ctagcatgcgactgccgcctgctgtgggtggtgcgaaggcaaccatatctggagtttggc
ggaaatccaccgacttgcagaacctcagtgcagttgcagggttggtattttctggacttt
actgaagctgaactcccaggtctgctcacatgtcggcagcctcgtattctgaaccgcaaa
cctcaaaaagtgagagtagatcaaggacacacagtggtgtttgaatgcaatgcagaaggt
gaccctgtgccatcggtcacctggataagcccacagctaaaacctctatcgcccattggc
agaatacgggctctctctaatggctcgctggaggttcgctatgcccaacctatggacagt
ggtgcttatttctgtgtggcatctaacgcggcaggaaatgacagcatgcccgtcagcctt
catgtccgagcctttccagcatcttccaaaaagaacctccgtcttaaaggctggtttgcc
tttccgtccgcctcgccaggtgtgagtggagaccagaatatctcatttgatgtaaagacg
ttactggtagctgcaaccattggatttctttcattcttcagctctgtgagcgtatgtttc
atcttcatgctcctctggagtaagagtaaagggcaaataaagaacacagccacaatagca
tacgtgccacgaagtgctgagtcaagtaataacggagggaaaggcaactatatggagaca
agcaggttcaccatgaaactaatatga
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