Pseudochaenichthys georgianus (South Georgia icefish): 117454821
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Entry
117454821 CDS
T09629
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pgeo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pgeo01100
Metabolic pathways
Module
pgeo_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117454821 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
117454821 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgeo01003
]
117454821 (xylt1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
117454821 (xylt1)
Glycosyltransferases [BR:
pgeo01003
]
O-Glycan biosynthesis
Glycosaminoglycan
117454821 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
117454821
NCBI-ProteinID:
XP_033949955
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All DBs
Position
1:complement(15277240..15372611)
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AA seq
944 aa
AA seq
DB search
MVGGLCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEDRENGGSNVREKRDRVAG
NKAAGSDYFQHGLQQRQRQHLQPPGKGSSRHIQQPDGYYSHRPKEKNRVDSNNENSVPKD
FENIDNSNFGARSQPHRQSVGATSSKQQREHLQEKAHAQQQAWQDTSPSRNSNEVLPVGH
QTLALGNNASHHGGVGGVSRQHYRASQAQQAESQHRHQYPHRRQATAAPLEVTYDEPPKC
EISGKEAISALSRAKSKECRQQIAEVYCRHKEGQLMPEKVTRYCPLEGKANTNVQWDEDS
VEIFPIKPVRIAFVLVVHGRASRQFQRLFKAIFHSSHYYYIHVDQRSDYLYRQIQAMAAH
YPNVRVTPWRMATIWGGASLLTMYLRSMADLLAMRDWSWDFFINLSAADYPIRTNNQLVA
FLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIAEGISVDGGSDWFL
LNRMFVEYVINSKDDLVTSMKRFYAYTLLPAESFFHTVLENSAHCESMVDNNLRITNWNR
KLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTVRPTFFARKFEASVNQEIVNQLDSYLY
GPFPQGTQGLNSYWENVYDEPDGVASLSDTQLTYFHSFSRLGLARAAASLQGNPKDHSCR
YFPMGHPVSVHLYFQADQFQGYLVKHHATNLATSKLETMETWVAPKKNFRLTTPASSTFS
RLQLAEIGTEWDAKERMFRNFGGLMGPMDETVGMQKWSKGPNVTVTVVWIDPTNVIAATY
DILIDAGAEFTHYRPPLNLPLRPGVWSVRILHHWSPVGEMRFLIAPLTYSKHQPIRQEDT
LKLHNGPTKNSYMEQSFHGLNPVLNIPVSLGFVEQAKRNAALTGPELERWSDSLVGEMWE
AADVCAMGPTACPVMQACPKNPWSSLSPDPKSHMGVAREDGRIR
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggcttatgtgctcgcaggttggcccgccggtctcggtccgccctgatagct
gccctcaccgtgctgctggtgcagacactgatagtgtggaacttcagcagcctcgactcc
ggcgaagaccgggaaaacggaggctccaacgtgcgggagaagagggaccgggtcgcgggc
aacaaagccgctggcagcgactatttccagcatgggctccagcagcggcagcggcagcat
cttcaaccgcccgggaaggggtcgtctcgccacatacagcagccggatggatattactcc
caccggccgaaggagaaaaatagagtggacagcaacaacgagaactctgtacccaaagac
tttgaaaacatagacaatagtaactttggagcgcgctcgcagccccaccggcagtctgtg
ggggccaccagcagcaaacagcagcgggagcatctgcaggaaaaagcgcatgcccagcag
caggcctggcaggacacctccccgagccgaaactccaacgaggttctacctgtaggccac
cagacgctggcgctgggaaacaatgcctcccaccatggaggtgtcgggggagtgtcacgg
caacactaccgtgcctcacaggcccagcaggccgagtcacaacacagacatcagtatccg
cacaggaggcaggcaaccgccgcgccgctggaggtgacctatgatgagccgcccaagtgt
gagatcagtgggaaggaagccatttcagctctatccagagccaagagcaaggagtgccga
caacagatcgcagaggtgtactgcagacacaaggaagggcaattaatgcccgagaaggtc
actcggtactgccctctcgagggtaaagccaatactaatgtccagtgggatgaagactct
gtggagatctttcctataaaaccagtcagaatagcgtttgtcctggtggtccacggacga
gcctcccgccagtttcaacgcctcttcaaagccatcttccacagctcgcactactactac
atacacgtggatcagcgctccgactatctgtataggcagattcaagccatggctgcccat
tatcccaatgtgagggtgacaccctggcgcatggccaccatctgggggggggccagtctg
ctgaccatgtacctccgcagcatggccgacctgctggccatgagggactggagctgggac
ttcttcatcaacctcagtgctgccgactaccccatcaggaccaacaaccagctggtggcc
ttcctgtccaaatacagagacatgaacttcatcaagtcccacggcagggacaacgccagg
tttatccgtaagcagggtctggaccgtctgttcttcgaatgcgacacccacatgtggagg
ctgggggaccgtaaaatcgcagaaggcatctctgtggatggagggtccgactggttcctc
ctcaaccgcatgtttgtggaatatgtcatcaactccaaggacgacctggtcaccagcatg
aagcgcttctacgcctacactctgctgccggccgagtcgttcttccacacagtgctggag
aacagcgcccactgtgagagcatggtggataacaacctgcgcatcaccaactggaaccgc
aaactgggctgtaagtgccagtacaagcacatcgtggactggtgcggctgctcccccaat
gacttcaagcctgcagacttccaccgctttcagcaaacggtgcggcccaccttctttgcc
aggaagtttgaggccagcgtgaaccaggagatagtgaaccaactggactcctacctgtac
ggacccttcccccaggggacgcagggcctgaactcctactgggagaacgtttacgacgag
cccgatggtgtggctagcctctcggacacgcagctcacgtacttccactctttctcgagg
ctgggtctggcccgagcggccgcctctctgcaggggaacccaaaggatcacagctgcagg
tacttccccatgggtcatccggtgtcagtgcatctctacttccaggcagaccagttccag
ggctacctggtgaagcaccacgccaccaacctggcaacgagcaaactggagaccatggag
acctgggtggcacccaagaagaactttaggctaaccacgcctgccagcagcacattcagc
aggttgcagcttgcagagattggcactgagtgggatgccaaagagcgcatgttcagaaac
ttcggcggcctgatgggccccatggacgagacggtgggcatgcagaagtggagcaagggg
cccaacgtcaccgtcacggtcgtgtggatcgaccccaccaatgtcatcgcggccacctat
gacatcctgatcgacgcgggggcagagttcactcactaccgcccgccgctcaacctgccg
ctgcggcccggcgtgtggagcgtccgcatcctgcaccactggagccccgtgggcgagatg
cgcttcctcatcgccccgctgacctacagcaagcaccagcccatacgacaagaggatact
ctgaagctccacaatgggcccaccaagaacagctacatggagcagagtttccacggcctc
aacccggtgctcaacatcccggtcagcctgggcttcgtggagcaggccaagaggaacgcg
gccctgaccggccccgagctggagcgctggtcagacagcctggtgggcgagatgtgggag
gcggccgacgtctgcgccatgggccccaccgcctgccccgtcatgcaggcctgtcctaag
aacccctggagctccctgagcccagaccccaagtcccacatgggagtggcgcgcgaagac
gggcgcatcaggtag
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