Pseudochaenichthys georgianus (South Georgia icefish): 117454870
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Entry
117454870 CDS
T09629
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117454870 (atxn1a)
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Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
117454870
NCBI-ProteinID:
XP_033950030
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Position
11:complement(18927108..18933654)
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AA seq
791 aa
AA seq
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MKSNQERSNECLPPKKREIISSTLPSELRSPTIPPASDSQRTENMAWLASVAAGNESGVG
GHRSSSQSDSLQYKSLFSTSDSSSSSLSLVSSLPTVYTSALSQSTGGGTVHYAQLPPNLQ
FIASPYSAPYASYISPQLLPPPPPPPPLTSSSSSSLAAQRHSYTETVSAPSHASKHDQQR
ASSARASMPPPSTDLYPHQVQMSTSTRTVPSPHYQGGVHLPLQSLHPHHSLGHGMSQLVV
QYSDGPTRKDEGGPRHREHHNGELERGRRFGMSPESNLSKPGSKSRDATLSLSSYEARQL
VLHSDYATHDHSGLRTSFMLMPNSHGDHQLVQHRAGNEKLTTCAPAHLEKGGIILGKPVN
RTTSSSNTSSSFTFASPLSVDSLKAAVGTLSPQTVIQTTHSATESLSMGLPSSSFYPQPP
IIGYIAGGAGSHTPISYHTSLQQHLLIPGTQPVIIPVSGSGVATLEPVTSSSQAASFPTR
LPHTYIAAPKGETLEHHGGSYHQSVSGAVVQAQLHLPIFPAPPGVVATSAPPSSSSTGAP
PSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISSDLKIDSSTVERIEGSPASHNF
AVVQFSVGEHRSQVSVEVLVEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSVGDVCISLT
LKNLRNGSLKKTQPLELVTPSSDYLKPPRAVSERENGISQRGSAASGNGGSNVGNGDLMF
GERGALSKGQVSSSAQAGASKPSGSRKRRWSAPEGRKVDKSEEEPPLTLPKPSFIPHEVK
VSIEGRSNIGK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaatcaggaacgcagtaatgaatgtctgcccccaaagaagagggagatcatc
tcaagcacattaccctctgaactccgctcccccaccatcccccccgccagtgacagccag
cgcacagagaacatggcctggctggccagcgtggctgctgggaatgagagtggagtgggc
ggtcaccgtagctccagtcagtcggacagcctccagtataaatccctcttctccacctcg
gactcttcatcctcctcactgagtctcgtctcatctcttccgacagtgtatacgtccgcc
ctgtcacagtccactggtggaggaactgtccactacgcccaactgcctcccaacctgcag
ttcatagcctcaccctacagtgccccatacgcgagctacatctcccctcaattgcttccg
cctcctcctccacctccccccctcacctcctcttcgtcctcctctttggccgcgcagaga
cactcgtacacagagacggtgtctgctccttcgcacgcctccaaacacgaccagcagaga
gcgtcctcggcacgcgcctccatgcctccgccttcgacagacctctaccctcaccaagtt
cagatgtcaacgtcaacacggactgtgccgtcacctcattaccaaggaggcgtccacctt
cctctccagtcactgcacccccaccattctttgggacatgggatgtcccagcttgtggtg
cagtattcggacggacccacaaggaaagatgaaggtggccccagacacagagagcaccac
aatggagagctggaaaggggtcggcggtttggaatgtcccccgagtccaacctctctaag
ccagggagcaaatcccgggacgccacattgtctttgtcctcttacgaggcccgccagctg
gttctgcactcagactacgccactcacgaccactcagggctgagaacctcgttcatgctg
atgcccaacagccatggggaccaccagctggtacaacacagagccggcaacgagaagctg
acaacctgtgcccccgcacacctggagaaaggtggcatcatcctgggcaagcctgtcaat
cgcacaacctcctcctccaacacctcctcctctttcacgtttgcatccccattaagtgtg
gacagcctgaaagctgctgtcggcacactgtcgcctcagaccgtcatccagaccacccac
agcgccacagagtcactgtcaatgggtctcccctcctccagtttctaccctcagccacct
ataattgggtacatagcagggggcgctgggagccatacgccgatcagctatcacaccagc
ctacaacaacacttactcattcctggcacccaaccagtcattatccctgtcagtggaagt
ggagtggccacattggaacctgtaacatcatctagccaagccgcctcgtttcctaccaga
ctcccacacacatacattgcggcccccaaaggagaaacgctagagcaccacggcggctcg
tatcaccagagcgtttcaggtgcagtggtccaagcccagcttcatctccccatttttccc
gctccgccaggggtggtcgcgacttctgctcctccttcctcatccagtacgggggcgccc
ccatcactccccccttatttcatcaagggctccatcatccagctggccgacggggagctg
aaacgtgtggaggacctgaagacggaggactttatccagagcgctgagatcagcagcgac
ctgaagatcgactcgtccacagtggagcgcatcgaagggagccccgcctcacacaacttt
gctgtggtgcagttctccgttggggagcaccgttcacaggtgagcgtggaggtcctggtg
gagtaccccttcttcgtgttcggccaaggctggtcttcatgctgcccagaccggaccacg
cagcttctggagctgccttgcaccaagctctctgtgggcgacgtttgtatttccctcacc
ctgaagaacctgaggaacggatccctgaagaagacccagcccctggaactggttacccct
tcctctgattacctcaaaccccccagagctgtctcagagcgggagaacggcatcagccag
cgagggagcgctgccagtgggaatggaggcagcaacgtgggaaacggggatctcatgttt
ggggaaagaggggcactttctaaaggtcaggtttccagcagcgcacaagctggcgccagc
aagccatcaggaagcaggaagaggagatggtctgctcctgaaggtcggaaagtagacaaa
tcagaggaggagccacctttgaccctgcccaaaccttccttcatcccccacgaggtgaag
gtcagcatcgagggaaggtcaaatattggcaagtga
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