Pseudochaenichthys georgianus (South Georgia icefish): 117454875
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Entry
117454875 CDS
T09629
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117454875
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117454875
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
ATG17_like
COG6_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117454875
NCBI-ProteinID:
XP_033950038
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Position
11:14691999..14699424
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AA seq
685 aa
AA seq
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MEHSPSMNLSAVDGQDMEDQRPLLPNRVLPPPQACSPQCGIHHTVQPSADHTVWLDRTQA
MATTPLYNGRLYVTSSPRANKKGQKGKEKKYQKKSTGTKQTPAHKECNYQCKANNSEAQR
LLEKVTSFSDVPCSLPLQSPRRPHLWSYVESRGRRSSGSVSLEMHDRQTLPEIIITSKDD
DFEPQNETFQHGQEPTEGRGLLPGAEGPAPDPETSSQTSPKHKEESKDDSYWKTHNIGWR
LVHRRALFLRRQRLNDCALAVGLFGMLLMVMETELSWSIYSKSSIYSLALKSIISLSTII
LLGFVIAYHCCEIQLYVHDIGAEDWWIALTTDRVALVALELSVVVIHPYPVGLMAYFQQT
FQHAPARLSLSETELEIILALPMFLRLYLLGRAMMLHSRLFTDTASRSIGALNKIHFNTR
FVGKTLMTTYPGTVLMIFSVSLWIVAAWGLHVCERHHNYTDLSSNYMEALWMVSVTFLSI
GYGDVVPHTYCGRSICLLTGIMGAGCTVLVVAVVARKLELTRAEKHVHNFMMDSHISKRI
KIAAANVLRETWLIYKHTKLSRERDQSRVRMHQRKLLLAIHQLRRVKVEKRILADQGNTL
VDLSKVREMQTVMYGVLEEVQGCRAELDTHIHSLEKNVEELREGFRSLMPLLSRTLSTQN
SSIRHLLREREVKAETDTAGASEES
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggagcactcgccctctatgaacctgtcagcggtggatggacaggacatggaggaccag
cggcccctcctccccaacagggtgctccccccccctcaggcctgctctcctcagtgtggg
atacaccacacagtccaaccgtcagctgatcacaccgtgtggctggacagaacccaggcc
atggccaccactccgttgtacaacggccgtctttatgtgacctcttcacctcgcgccaac
aagaagggacagaaaggcaaagagaagaaatatcagaaaaagtcaacaggaactaaacag
accccagctcacaaggagtgtaattatcagtgcaaagccaacaactcagaagctcagaga
ctcctggagaaagtcacctctttctccgacgtcccatgttcattaccccttcagagcccc
cgcagaccacacttatggtcttatgtagagagcagagggcgtcgctcctcgggcagcgtt
tccttggagatgcacgaccgccagactctcccagagatcatcatcaccagcaaagatgac
gactttgagccgcaaaatgagacgttccagcatggccaggagccaactgagggcagaggc
ctgctgccaggagcagagggtcccgctccggaccccgaaaccagttcccagaccagccca
aagcacaaggaggagagcaaagacgactcgtactggaagacccacaacatcggctggcgg
ctggtgcaccggagggctctgttcctgaggaggcagcggctgaacgactgcgcgctggca
gtggggctgttcgggatgttgctcatggtgatggagacagagctctcctggagcatctac
agcaagagctccatctactcgctcgcactgaagtccatcatcagcttgtctacgatcatc
ctgctgggcttcgtcatcgcgtatcactgctgtgagatacagctctatgttcacgacatt
ggtgcagaggattggtggattgccctgacgactgaccgtgtggctctggtagccctggag
ctgtcggtggtggtcattcatccctatccagtggggctgatggcgtacttccagcagacc
ttccagcacgcccccgcccgcctgtcgctgtcggagacggagctggagatcatcctggct
ctgcccatgttcctcaggctctacctgctgggccgcgccatgatgctgcacagccgcctc
ttcactgacaccgcatcccgcagcattggagcgctcaataagatacacttcaacacccgg
tttgtggggaaaacactgatgacaacctaccccgggacggtgctgatgatattcagcgtg
tccctgtggatcgtggcagcgtggggcttacatgtctgtgagagacaccacaactacacg
gacctgagcagcaactatatggaggctctgtggatggtctccgtcaccttcttgtccatc
ggttatggagacgtggtgcctcacacatactgcggccgcagcatctgcctcctcactggg
atcatgggagccggctgcacggtgctggtggtggctgtggtcgccaggaagctggagctg
accagagcggagaaacatgtccacaacttcatgatggactcccacatctccaagaggata
aaaattgctgcagcaaatgtgctgagagagacttggcttatctacaaacacactaagctg
tcaagagaaagagaccagtccagagtccgcatgcaccagaggaagctgctgctggccatc
caccagctgcggcgagtgaaggtagagaagaggattcttgcagatcagggaaacacactt
gtggatctgagcaaggtgagagagatgcaaacagtgatgtatggcgtgctggaggaggtg
cagggctgcagggcggagctggacacacacatccatagcctggagaagaacgtggaggag
ctgagggagggcttcaggagcctgatgccactcctgtccaggaccctgtcaacgcagaac
tcctccatccgccacctgctcagggagagggaggtgaaggcggagactgatacggctggg
gcgagcgaagagagctag
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