Pseudochaenichthys georgianus (South Georgia icefish): 117454887
Help
Entry
117454887 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: syndecan-3-like
KO
K16337
syndecan 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117454887
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117454887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pgeo00535
]
117454887
Proteoglycans [BR:
pgeo00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
117454887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
BNIP2
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
117454887
NCBI-ProteinID:
XP_033950048
LinkDB
All DBs
Position
11:21051577..21085965
Genome browser
AA seq
426 aa
AA seq
DB search
MKLPWLLPLAALLTHTATAQTWSPPPDDDGSARDDIYDDDDLYSGSGSGFPDIRLRPTSA
GVTFTTEETLLLSTTQATGPAPSASPAAEPSPNPEDSIATPLPTEAEGESGAFWDREKEL
EKERELETEREREGARDAEGTGEGRKKVERQRESGERERERERERVRELEKEKGARARDW
KQPPPPRPHTASPVVTTELTTIPAESAAPSAGSDDLSTTEEEEDVYLSAEPTAFSPGFDI
ETTTEEDASTTAETTTEQTTAAPPPPTTAAPTTVRTRVSFRPRVPMTTATQAAPSESTTR
SQQPTSTQETNNEAGAAGTSGDFEIPDDRRNDLGRGLFPVDADLSGNTVDGGSSAAQLPQ
KNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDK
QEEFYA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccctggctactgccgctcgcggctctgctcactcacaccgccacggcacag
acttggtcgccccctcccgatgacgacggctcggcgagagacgacatctacgacgatgac
gatctctactcaggctccggctctggctttcctgacatcaggctgaggccgacgtcggcg
ggcgtgaccttcaccaccgaggagaccctcctcctctccaccacccaggcaacaggcccc
gccccctccgcctcacccgccgccgagcccagccccaacccggaggactccatcgccacc
ccactgcccactgaggccgagggagagagtggtgcattctgggacagagagaaagagctg
gagaaggagagagagttggagacggagagagagagagaaggagcaagagatgcagaggga
actggagaagggagaaagaaagtggagagacagcgggagagtggagagagagagagggaa
cgagagagggagcgggtccgagagctggagaaggagaagggagcgcgagcgagagattgg
aagcagccgccgccgcccagaccacacaccgcgtcccccgtggttaccaccgagctgaca
accatccctgctgagagcgcggcgccctctgcaggctcggatgacttgagcaccacagaa
gaagaggaggacgtctacctgtcagctgaacccacagcgttttcccccggcttcgacata
gagaccaccacagaggaagacgcgtccaccactgcagagacgaccacagagcagaccacc
gccgcaccccctccccccaccaccgctgcacccaccaccgtcaggaccagggtgtccttc
aggcccagggttcccatgacgacagcaacacaggcggcgccgtcagagagtacgacccgc
tcacagcagcccacatctacacaggagactaacaacgaggcgggtgctgcaggaaccagt
ggagactttgagatccctgatgatcgtcgtaatgatctgggtcgaggtttgtttccagtg
gatgctgatctgagcgggaacacggtggacggaggaagctctgccgcccagctgcctcag
aagaacatcctggagagaaaagaggtcttgatagcggtgatagtgggaggagtagtgggt
gccttgtttgccgctttcctggtgatgctgctggtgtacaggatgaagaagaaggacgag
ggcagctacacgctggaggagcccaaacaagccaccgtcacctaccagaaaccagacaag
caggaggagttttacgcataa
DBGET
integrated database retrieval system
