Pseudochaenichthys georgianus (South Georgia icefish): 117454964
Help
Entry
117454964 CDS
T09629
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117454964 (snx13)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117454964 (snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
117454964
NCBI-ProteinID:
XP_033950164
LinkDB
All DBs
Position
11:22403280..22429249
Genome browser
AA seq
978 aa
AA seq
DB search
MSNVPQQRISTTQQTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYVFCFIVGGFAVTL
LYGKINSEKHLEKCEHSYLAPTQIGILKTLDEMKLEMKPIKIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKQRDITEELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPSELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLHSGKEVDALKLAANFGKLCVIPLDHILIHNIALQFFMDYMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMQNWQKDGKKQPSNTKGLLKAAALGVYEQYLSDKASPRVQVDEASVIKL
GEKLQKDDPTPEIFDDIQKSVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGDGESFNGSPTGSINLSLDDLSNSCHDDTLHLHAFISDTADACLPGFWGAAGVCNDHGK
TYALYAITVVRRSHDGSDDCWKTYRRYSDFHDFHMRVTEQFENLASILKLPGKKTFNNMD
RDFLEKRKKDLNSYLQLLMNPEMVKACPTLIAYVYDFLENKAYSKGKGEFARKVDTFVNP
LRSSMRNVSNAVKSLPDSLAEGMNKVTDNMGRMSERLGQDIKQSILKVPPLLPKTDIDPE
HCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINR
KIVDHVDYMTSPEQVADYVKKFRDSYWPNGILAETLPRREKNIRQRTRIAAKTSLLGIMP
DELKHIIGADTTRKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSR
SPRIHKYSQKLKSSSLKR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtccctcaacaacgaatttctacaacacaacaaacacaggccagtctgtcc
atctggggatgggggggtcttggagtcgtgctgttcctcgtcacctttggaccctttgcc
atattctacctggctttttatgtcttctgcttcattgtagggggctttgcggtcactctg
ctctatggaaagatcaactcagagaaacacctggaaaagtgcgagcactcctacttggcc
cccacacaaattggtatactaaagacattggatgagatgaagttggagatgaagcctata
aaaatagacaggagactgactggctccagttttatagatgaaccactacagcaggtgatc
cagtttgctctgagagattatatccagtactggtactacactctgagcgaggatgagtcc
ttcctactggagatcagacagacactgcagaatgccctcgtccagttctctacacggtcc
aaagaggtggactggcagccttacttcactactcgcctggtggacgactttgccacccat
ttacgtgtcttcagaaaagcccaggaccgcctcgcagacagagaggacaagcaaagggac
ataacggaggagctggtggactccttctttgaggccgaggtggagatggaaaggaagatt
tgtcgagacgtggtgtgcacttcacacaaagatgaagaaggttttcttagggacttgtgt
gagttgcttctgtatctgttactacctcctggagatttccacaacaagaacatgagatac
ttccttagggaggtgctggcccgtggtgttctactccctctgatcaaccagcttagcgac
ccagactacatcaatcagtttgtcatctggatgatacgggactccagctgtaattatgaa
gccttcatgaacatcctgaagctgacagacaagccctctgagctggaggcggtgaaggac
aaggtgctggaggagctgcagtacctccgctccctggacaccgccggagatgacatcaat
gtgatcaagaaccagatcaacagtcttctgtttgtgaagaaggtgtgtgagactcggatc
cagagactacactctggcaaggaggtggatgccctgaagctggcagccaactttggcaag
ctgtgtgtcatccctctggatcacatcctcatccacaatatagccctgcagttcttcatg
gactacatgcaggcggcgggggcccaggcagagctgttcttctggctcactgtggagggc
tacagggtgacggcgcagcagcagctggaggctatgcagaactggcagaaagatggcaag
aagcagcccagcaacaccaaggggctgctgaaggccgctgcactgggcgtctacgaacaa
tacctctcggacaaggcgtcgccccgggtgcaggtggatgaagcgtccgttatcaaacta
ggggagaagctccagaaagacgaccccacaccagagatatttgatgacattcagaaaagt
gtgtatgacatgatgctacgagatgagcgctactacccctccttcaagcagagtcctctc
tacgtccgcatgctagccgagctggacatgttgaaagagccgagctaccgggggtctgat
gacggggatggagaatccttcaatggctctcctacaggaagcataaacctatctttggac
gatttgtccaactcctgccatgatgacactttgcacctacatgccttcatctctgacaca
gctgacgcttgtctccccggcttctggggtgctgcaggggtgtgcaacgaccacggtaag
acctacgcgctgtacgccatcacggtggtcagacgcagccatgacggcagtgatgactgc
tggaagacttatcgccgctactccgacttccacgacttccacatgagggtcactgaacag
tttgagaacctggcgtcgattctcaagctgccagggaagaagaccttcaacaacatggac
agagacttcttggagaagagaaaaaaagacctcaattcttacctgcagttgctgatgaac
ccagagatggtgaaggcctgtccgactctgattgcttatgtctatgacttcctcgagaac
aaagcctacagcaagggcaagggagagtttgcacgcaaggtggacacatttgtaaatcct
ctgaggagctccatgagaaacgtgtccaacgcagtcaagtctctgccggacagtctggcg
gagggcatgaataaggtcactgataacatgggccgcatgtcagagagactcgggcaggac
attaaacagtccatactcaaggtgcctccactcctccctaagactgacatcgaccccgaa
cactgtcgagtttctgctcagctcgatgacaatgtggatgataacataccgctgagagta
atgctgctactgatggacgaggtgtttgaccttaaggagaaaaaccagtggctgcgcagg
aacataaagaacctgctgcagcagctcatcagagccacatatggcgacaccatcaacaga
aaaattgtggatcatgtggactacatgacctcaccggagcaggttgcagactacgtcaag
aagttcagggactcttactggcccaacggcattttggctgagacgctgccccgccgggag
aaaaacatccgccagaggacacgaatagctgccaagactagtctgctgggcatcatgcca
gacgagctgaaacacatcatcggagcagacaccacgaggaagggcatcctccgcgtcttc
gacatgtttcagtaccagcccatgaaccgccggctagtctacgttttcctggagggcttc
ttggagacgatgttcccccagtacaaattccccgagctctttgtcaagctgcactcccgc
tcgccacgcatccacaaatatagtcagaaactcaaatcttcctccctcaagaggtga
DBGET
integrated database retrieval system
