Pseudochaenichthys georgianus (South Georgia icefish): 117455035
Help
Entry
117455035 CDS
T09629
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
117455035
NCBI-ProteinID:
XP_033950271
LinkDB
All DBs
Position
11:complement(2661318..2763401)
Genome browser
AA seq
1130 aa
AA seq
DB search
MASPSWFSPWRRSLLLILATCFLSEFASSTHFPRDLEPISVVSSAQAYQFPGFQGLLQDN
DTLRLGLDFQRLLRLNHMLYIAARDHVFAVNLTTASEEFFPQLKLTWRSEDVSKCTVRGK
NSDECYNYVKVLVPRDDETLFACGTNAFNPTCRNYKMASLEQVGEEVVGQARCPFESGQS
NVGLFAGGDFYSATMTDFLASDAVIYRSLGEGRPVLRTVKYDSKWLREPHFLHAIDYGNY
VYFFLSEIAVEYTALGKVVFSRVTRVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFF
YFDILQSLTNVLQINQRPAVVGVFTTQDNSIPGSAVCAFYMDDIESVFDGKFKEQRTSDS
SWTPVPEEQVPRPRPGTCTGDGPAVDYKSSVQLPDEMLMFIKSYPLMDEAVPSVNHRPCF
TRTSSRSKLSQIVVDVSAGPYKDHTVMFLGSDDGRVLKLLTSTHPNDSFGSKLLEDIHVY
NPSKCNVQGQEDRRVLALELDKERHALFVAFSSCVIRVPLSRCSQHGACRRACLASRDPY
CIWLRTGSCANMAPGFKAGFEQDIEGDHLFHQDSCHVNVLATVRNQESAADSAYGVRGFP
EMEHAAANVHYTLLLACVLVAFSLGAIVSGFLVSWYCSRSATQQARRMGKDPEVPHTLSL
RSLAKLNGLLDGQKKEDKHDVSILEMYSSFIPNGGAEPHFNTPAHPGLPLGDPELSLSQS
LSQGDGDLSGLPTPVSTPELPIKNMRALRHHQYERNQNCNNAADSSHKPTPCGSTSSLGF
MAVVRNSMTQQVFPFSHHHGNSLNNVAAHGAATSSTSLHLPDERNILNDEQAAEGGGLPH
HHLSQQSLPQRGGEQSALDELLKHIHEVSASGTGGIKVLTSTSSSGAHHLNHHPYYNNNP
HSQTSSHYYSHSHHHSNQHNNNSSNGVHHQQQQIPENDPAPYYSTSTLPRDAPTQNSSSS
ASSSSSSSDNPTSSTSIQSSNSTSSSLQQQVIPERPGRTSVSVTRHQSQRHVLIKMGSGG
RAVPRHHSFNQRTPQQAHFLARLNTNSSSNGPPGDSMAADMSTNASCERQGPPVASACLT
RQHSYSEGPHAQRAATVRRTLSLKPEVPPKPLFLPNTATSSMAEAGTFKY
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcccagctggttttcaccatggcgacggtcgctgctgcttatccttgctacc
tgtttcctgtctgagttcgcctctagcacgcacttccccagagacctggagccaataagt
gtggtcagctcggcacaggcgtaccagtttccaggcttccagggtctgcttcaggacaac
gacaccctgcgtctgggtctggactttcagaggctgctgcgcctcaaccacatgctgtac
atcgctgccagggatcacgtgtttgccgtgaacctgaccacagcttcagaagagtttttc
cctcagctgaagctgacatggcgatctgaagacgtcagcaagtgtacggtcagaggaaag
aacagcgacgagtgctacaactacgtcaaagtgctggtgccgcgagatgacgagacgctg
ttcgcctgcggtaccaacgccttcaaccccacctgcaggaactacaagatggcgtccctg
gagcaggtgggggaggaagtggtgggtcaggcccgctgtccctttgagtctgggcagtcc
aatgtgggactgtttgcaggtggagacttctactcggccaccatgacggacttcctggcc
agcgacgccgtcatctaccgcagccttggggaaggccggcccgtcctcaggaccgtcaag
tacgactccaaatggctccgagagcctcactttctgcatgccatcgactacggtaactac
gtatacttcttcctcagtgagatcgctgtggagtacaccgccctgggcaaggtggtgttc
tctcgagtcacccgggtctgtaagaacgataatggaggatctcccagagttctggaaaga
tactggacttcttttctcaaggctcgtctgaactgctcggttcctggagattcgttcttc
tacttcgacattcttcagtccctcaccaacgtgctgcagattaaccagaggcccgctgtg
gtgggggtcttcaccacgcaggataacagtattcctggctcagcagtctgtgcgttctac
atggacgacatcgagagcgtcttcgatgggaagttcaaggagcagcggaccagcgactcc
tcctggactccagtccctgaggagcaggttcccagacccaggcccggtacatgtaccggt
gatggtccggctgtggactacaaatcatcggttcagttaccagacgagatgctgatgttt
atcaagtcgtaccctctgatggacgaagccgttccatctgtgaaccaccggccctgtttc
accaggacttcgagcaggtccaagctgagccagatagtggtggatgtgtctgccgggccg
tacaaggaccacacagtaatgttcctgggttcagacgatggcagagtcctgaagcttctg
accagcacacatccgaacgacagcttcggatccaaactgctggaggacatacatgtctac
aatccatccaagtgtaatgttcagggtcaggaggacagaagggtactggctctggagctg
gataaggagcgccatgcgttgttcgtggcgttcagcagctgtgtgatccgagtgccgctc
agccgctgcagccagcatggagcctgtaggagagcctgcctggcctcccgtgacccatac
tgcatctggctgcgcaccgggagctgtgccaacatggcgccaggtttcaaggccgggttt
gaacaggatattgaaggtgaccacttgtttcatcaggacagctgtcatgttaatgtgttg
gcaactgtacggaaccaggagtctgcggctgactcagcctatggtgtccgtggttttcca
gagatggagcatgctgctgctaacgtccactacaccctgctgctggcctgcgtgttggtg
gccttctcgctgggcgccatcgtgtcgggcttcctggtgtcgtggtactgcagccgcagc
gccactcagcaggccaggaggatggggaaagaccccgaggtcccgcacaccttatctcta
cggtccctcgccaagctcaacggactgctggacggacagaaaaaggaggacaaacatgac
gtgtccatcctggagatgtacagctcctttatccccaacggcggcgcagagcctcacttc
aacacccctgcgcacccgggcctgccgctgggagaccccgagctcagcctctcccagtct
ctgtctcagggagatggggatctgtccggcctgcccacgcctgtctccacccccgagctc
cccatcaagaacatgagggccctgcggcaccatcagtatgagaggaaccagaactgcaac
aacgcggcggacagcagccacaaacctacgccgtgtggctccacatccagtctgggtttc
atggctgttgtcaggaactctatgacacagcaggtgttccccttctctcatcaccatggc
aacagtttgaacaatgtagcagcacatggagccgctacctcttcaacttcactgcatctg
cctgatgaaaggaacatcttgaatgatgagcaggcagcagaaggcggaggactgcctcat
caccacctctcccagcagtccctgccccagagagggggggagcagtccgcgctggacgag
ctcctcaaacacatccacgaggtgagcgcgtcaggaaccggtggcatcaaggtgctcacc
tccacttcctcctctggagcacatcatcttaatcaccacccttattataataataatccc
cacagccagaccagctcccactactacagccacagccatcaccatagcaaccagcacaac
aataacagcagcaacggcgttcaccatcagcagcagcagatccctgagaacgacccagct
ccatattacagcacctccactctgccaagggatgctcccactcagaactcctcctcttct
gcttcttcttcctcgtcatcctctgacaaccccacctcttccacctccatccagtcatcc
aactctacttcctcctcactccagcagcaggtgattccagaaagaccaggaagaacaagt
gtctcagtcacacgccaccagtcccagcgccacgtgctcattaagatgggcagcgggggc
cgtgccgtgccgcgccaccacagcttcaaccaacggacgccgcagcaggcacactttttg
gccaggctgaacaccaacagcagcagcaacggccctccaggcgacagcatggcggctgac
atgagcacaaatgccagctgcgagaggcaggggcctccagtcgccagcgcctgcctgacg
cggcagcacagttacagtgaagggccacatgcgcagcgggccgcaaccgtccggagaaca
ctctcgcttaaacccgaggtcccgccaaaaccgctgttccttccaaacacagcaacatcg
tcaatggcagaggcgggaacattcaaatactga
DBGET
integrated database retrieval system
